RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 PROX1Q92786 737 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 CELF6Q96J87 481 aaKnown RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 MAN1C1Q9NR34 630 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 BMP10O95393 424 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 BPGMP07738 259 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 GRK4P32298 578 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 SOX10P56693 466 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 OLR1P78380 273 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 PIGWQ7Z7B1 504 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 ECHDC2Q86YB7 292 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 TDRPQ86YL5 185 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 OR52K1Q8NGK4 314 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 STAU1O95793 577 aaKnown RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 RAB15P59190 212 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 ZNF621Q6ZSS3 439 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 YAF2Q8IY57 180 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 C7orf26Q96N11 449 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 OSBPL7Q9BZF2 842 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 UNKQ9C0B0 810 aaKnown RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 VPS28Q9UK41 221 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 DEFB106AQ8N104 65 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 BPIFB6Q8NFQ5 453 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 SLC2A14Q8TDB8 520 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 AP3S1Q92572 193 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 FAM126AQ9BYI3 521 aaPredicted RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 POLR1EQ9GZS1 481 aaKnown RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 AGPSO00116 658 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 TSPAN19P0C672 248 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 RPL7AP62424 266 aaKnown RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 NOMO3P69849 1222 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 BNC1Q01954 994 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 LIN52Q52LA3 116 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 C10orf107Q8IVU9 208 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 GSTCDQ8NEC7 633 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 MAGEB10Q96LZ2 347 aaPredicted RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 DPPA5A6NC42 116 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 PRR5-ARHGAP8B1AHC4 643 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 AREL1O15033 823 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 RTP1P59025 263 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 ARHGAP8P85298 464 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 GPR107Q5VW38 600 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 LRRC49Q8IUZ0 686 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 TMEM161BQ8NDZ6 487 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 ZHX1-C8orf76Q96EF9 292 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 SNX8Q9Y5X2 465 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 GJB6O95452 261 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 CLTBP09497 229 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 RHOAP61586 193 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 TRAP1Q12931 704 aaKnown RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 DNAJC14Q6Y2X3 702 aaPredicted RBP13.31□□□□□ -0.28
SNED1-201ENST00000310397 LEMD2Q8NC56 503 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 EDEM1Q92611 657 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 PPP1R14BQ96C90 147 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 CHID1Q9BWS9 393 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 EHD3Q9NZN3 535 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 IPPQ9Y573 584 aa13.31□□□□□ -0.28
SNED1-201ENST00000310397 SAGE2PA6NJ88 616 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 LTFP02788 710 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 CAPZA2P47755 286 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 REPS2Q8NFH8 660 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 RCN3Q96D15 328 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 SENP6Q9GZR1 1112 aaPredicted RBP13.3□□□□□ -0.28
SNED1-201ENST00000310397 CDH19Q9H159 772 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 MBD2Q9UBB5 411 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 FETUBQ9UGM5 382 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 HACL1Q9UJ83 578 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 RGPD8O14715 1765 aaPredicted RBP13.3□□□□□ -0.28
SNED1-201ENST00000310397 PCBP1Q15365 356 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNED1-201ENST00000310397 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 TTYH3Q9C0H2 523 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 EPB41L1Q9H4G0 881 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 CLN6Q9NWW5 311 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 BCLAF3A2AJT9 711 aaKnown RBP13.3□□□□□ -0.28
SNED1-201ENST00000310397 MEIS2O14770 477 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 PTP4A2Q12974 167 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 SLC15A2Q16348 729 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 RBM15BQ8NDT2 890 aaKnown RBP13.3□□□□□ -0.28
SNED1-201ENST00000310397 PPP3R2Q96LZ3 170 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 TSEN34Q9BSV6 310 aaKnown RBP13.3□□□□□ -0.28
SNED1-201ENST00000310397 MECRQ9BV79 373 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 FHDC1Q9C0D6 1143 aaPredicted RBP13.3□□□□□ -0.28
SNED1-201ENST00000310397 TKTL2Q9H0I9 626 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 ALG9Q9H6U8 611 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 TRPC4Q9UBN4 977 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 DCCP43146 1447 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 SPATA31A5Q5VU36 1347 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 SPATA31A7Q8IWB4 1347 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 ALDH1A2O94788 518 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 IL12AP29459 219 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 EIF2B5Q13144 721 aaKnown RBP13.3□□□□□ -0.28
SNED1-201ENST00000310397 ATAD3BQ5T9A4 648 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 KBTBD2Q8IY47 623 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 NMUR2Q9GZQ4 415 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 PRDM5Q9NQX1 630 aaPredicted RBP13.3□□□□□ -0.28
SNED1-201ENST00000310397 SNX15Q9NRS6 342 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
SNED1-201ENST00000310397 CIDEBQ9UHD4 219 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms