RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 C10orf67Q8IYJ2 551 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 PGBD5Q8N414 524 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 PPHLN1Q8NEY8 458 aaKnown RBP21.57■■□□□ 1.04
ATG4D-201ENST00000309469 PTCD2Q8WV60 388 aaKnown RBP21.57■■□□□ 1.04
ATG4D-201ENST00000309469 WBP2Q969T9 261 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 ARNT2Q9HBZ2 717 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 ZNF334Q9HCZ1 680 aaPredicted RBP21.57■■□□□ 1.04
ATG4D-201ENST00000309469 SLCO1B3Q9NPD5 702 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 SSX2IPQ9Y2D8 614 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 STARD13Q9Y3M8 1113 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 A0A0D9SEW6 157 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 EDF1O60869 148 aaKnown RBP21.57■■□□□ 1.04
ATG4D-201ENST00000309469 CLDN11O75508 207 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 CNPP09543 421 aaKnown RBP21.57■■□□□ 1.04
ATG4D-201ENST00000309469 LINC00271P0C7V0 271 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 CA8P35219 290 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 PDE1BQ01064 536 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 TMCO4Q5TGY1 634 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 ARRDC2Q8TBH0 407 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 ZNF599Q96NL3 588 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 RBBP8Q99708 897 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 MANSC1Q9H8J5 431 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 PDFQ9HBH1 243 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 ATP13A1Q9HD20 1204 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 ALG13Q9NP73 1137 aaKnown RBP21.57■■□□□ 1.04
ATG4D-201ENST00000309469 TCAF1Q9Y4C2 921 aa21.57■■□□□ 1.04
ATG4D-201ENST00000309469 TPP1O14773 563 aa21.56■■□□□ 1.04
ATG4D-201ENST00000309469 MBL2P11226 248 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-201ENST00000309469 SPRP35270 261 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-201ENST00000309469 CHRNA4P43681 627 aa21.56■■□□□ 1.04
ATG4D-201ENST00000309469 SERPINB4P48594 390 aa21.56■■□□□ 1.04
ATG4D-201ENST00000309469 PDPK2PQ6A1A2 396 aa21.56■■□□□ 1.04
ATG4D-201ENST00000309469 TADA1Q96BN2 335 aa21.56■■□□□ 1.04
ATG4D-201ENST00000309469 MRM3Q9HC36 420 aaKnown RBP21.56■■□□□ 1.04
ATG4D-201ENST00000309469 IARS2Q9NSE4 1012 aaKnown RBP21.56■■□□□ 1.04
ATG4D-201ENST00000309469 PRKAG3Q9UGI9 489 aa21.56■■□□□ 1.04
ATG4D-201ENST00000309469 CCDC78A2IDD5 438 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 CCT8L1PA6NM43 557 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 TGM5O43548 720 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 IHHQ14623 411 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 PABPC1LQ4VXU2 614 aaKnown RBP21.55■■□□□ 1.04
ATG4D-201ENST00000309469 OR7D4Q8NG98 312 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 OR52K2Q8NGK3 314 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 CYP2S1Q96SQ9 504 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 DDX50Q9BQ39 737 aaKnown RBP21.55■■□□□ 1.04
ATG4D-201ENST00000309469 IL21Q9HBE4 155 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 TRPC7Q9HCX4 862 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 SMPD4Q9NXE4 827 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 ARL2BPQ9Y2Y0 163 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-201ENST00000309469 HOXD9P28356 352 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-201ENST00000309469 MAGEA9P43362 315 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 SGSHP51688 502 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 LIMK2P53671 638 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 ZNF177Q13360 481 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-201ENST00000309469 PPIGQ13427 754 aaKnown RBP eCLIP21.55■■□□□ 1.042e-6■■□□□ 14.2
ATG4D-201ENST00000309469 IL31Q6EBC2 164 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 CHST9Q7L1S5 443 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 HERC6Q8IVU3 1022 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 SLC25A41Q8N5S1 370 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 CCT6BQ92526 530 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 PTPRN2Q92932 1015 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 ZFRQ96KR1 1074 aaKnown RBP21.55■■□□□ 1.04
ATG4D-201ENST00000309469 ZBED2Q9BTP6 218 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 ASB3Q9Y575 518 aa21.55■■□□□ 1.04
ATG4D-201ENST00000309469 TTC24A2A3L6 582 aaPredicted RBP21.54■■□□□ 1.04
ATG4D-201ENST00000309469 TSPAN3O60637 253 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 NUMBP49757 651 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 PDE1CQ14123 709 aaPredicted RBP21.54■■□□□ 1.04
ATG4D-201ENST00000309469 ARMC3Q5W041 872 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 ESRP1Q6NXG1 681 aaKnown RBP21.54■■□□□ 1.04
ATG4D-201ENST00000309469 CCDC63Q8NA47 563 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 KLHL23Q8NBE8 558 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 ARMC2Q8NEN0 867 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 SLC22A12Q96S37 553 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 SPON2Q9BUD6 331 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 POLR1EQ9GZS1 481 aaKnown RBP21.54■■□□□ 1.04
ATG4D-201ENST00000309469 NSMCE4AQ9NXX6 385 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 STOML2Q9UJZ1 356 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 INSL6Q9Y581 213 aa21.54■■□□□ 1.04
ATG4D-201ENST00000309469 ILVBLA1L0T0 632 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 GOLGA8TH3BQL2 631 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 CXCL14O95715 111 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 CSE1LP55060 971 aaKnown RBP21.53■■□□□ 1.04
ATG4D-201ENST00000309469 SMAD3P84022 425 aaKnown RBP21.53■■□□□ 1.04
ATG4D-201ENST00000309469 ZNF235Q14590 738 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 STXBP5Q5T5C0 1151 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 DCLK2Q8N568 766 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 BADQ92934 168 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 CLP1Q92989 425 aaKnown RBP21.53■■□□□ 1.04
ATG4D-201ENST00000309469 SEMA3CQ99985 751 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 PLCD4Q9BRC7 762 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 KDM4CQ9H3R0 1056 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 A0A1B0GVM2 712 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 TCAF2A6NFQ2 919 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 MUSKO15146 869 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 KDELR3O43731 214 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 NEFHP12036 1026 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 TYK2P29597 1187 aa21.53■■□□□ 1.04
ATG4D-201ENST00000309469 LIG3P49916 1009 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms