RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 SLC10A2Q12908 348 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 POLD3Q15054 466 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 TTC7BQ86TV6 843 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 SLC13A5Q86YT5 568 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 SYCE1Q8N0S2 351 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 ATPAF2Q8N5M1 289 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CCDC63Q8NA47 563 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 VN1R2Q8NFZ6 395 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 HMGB4Q8WW32 186 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 HLA-CQ95604 372 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 MOCOSQ96EN8 888 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 HMCESQ96FZ2 354 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 SLC9A7Q96T83 725 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 EPAS1Q99814 870 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 FOXQ1Q9C009 403 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CARD9Q9H257 536 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PABPC3Q9H361 631 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 PPCSQ9HAB8 311 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PCDH18Q9HCL0 1135 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 SAYSD1Q9NPB0 183 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 DUS2Q9NX74 493 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 LSM7Q9UK45 103 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 SPTBN1Q01082 2364 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 SDK2Q58EX2 2172 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 HEPACAM2A8MVW5 462 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 GABRDO14764 452 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 INPP4BO15327 924 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CXCL10P02778 98 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CYP1A1P04798 512 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 PTPN2P17706 415 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 FGFR3P22607 806 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 FSHRP23945 695 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PSMB4P28070 264 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 SSTR1P30872 391 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CD86P42081 329 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 ZNF143P52747 638 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 METAP1P53582 386 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 DSC2Q02487 901 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 GUCA2AQ02747 115 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 C21orf62-AS1Q17RA5 79 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 HSF5Q4G112 596 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 HABP4Q5JVS0 413 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 SHKBP1Q8TBC3 707 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 ZNF483Q8TF39 744 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 NCSTNQ92542 709 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 SLC7A6OSQ96CW6 309 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 CSPG4P5Q96PW8 444 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 XPO6Q96QU8 1125 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 PLVAPQ9BX97 442 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 ABCC13Q9NSE7 274 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 UTP6Q9NYH9 597 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 IPO11Q9UI26 975 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 SUFUQ9UMX1 484 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PLA2G4CQ9UP65 541 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 KCTD3Q9Y597 815 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 HS3ST4Q9Y661 456 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PCNX1Q96RV3 2341 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 DSPP15924 2871 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 TRAV19A0A0A6YYK7 116 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 A0A1W2PQ67 120 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 RAMP2O60895 175 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 TBX10O75333 385 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 OAZ2O95190 189 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 ASMTLO95671 621 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 AGTP01019 485 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PDGFBP01127 241 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 ALPIP09923 528 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PRSS56P0CW18 603 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 GZMAP12544 262 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 SLC6A4P31645 630 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CD70P32970 193 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 RDXP35241 583 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 HYAL1Q12794 435 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 LRRC14Q15048 493 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 FAM78AQ5JUQ0 283 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CCDC91Q7Z6B0 441 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PTAR1Q7Z6K3 402 aaPredicted RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 TRIM74Q86UV6 250 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 EXOC3L1Q86VI1 746 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 LPCAT1Q8NF37 534 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 ATP2A3Q93084 1043 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 MYADMQ96S97 322 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 GDF15Q99988 308 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 DDX23Q9BUQ8 820 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 FBXO44Q9H4M3 255 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 HAUS2Q9NVX0 235 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 MTRRQ9UBK8 725 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 ANAPC5Q9UJX4 755 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 AGO1Q9UL18 857 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 ITM2BQ9Y287 266 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CA5BQ9Y2D0 317 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 COQ6Q9Y2Z9 468 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 UTP11Q9Y3A2 253 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 OR6C75A6NL08 312 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CCT8L1PA6NM43 557 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 E9PAM4 449 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 LEFTY2O00292 366 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 CLASP2O75122 1294 aaKnown RBP5.03□□□□□ -1.6
CAST-201ENST00000309190 TJP3O95049 919 aa5.03□□□□□ -1.6
CAST-201ENST00000309190 PIGNO95427 931 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms