RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 GRIN3AQ8TCU5 1115 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZNF599Q96NL3 588 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 HEPHQ9BQS7 1158 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 KLC2Q9H0B6 622 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 BTBD1Q9H0C5 482 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PDFQ9HBH1 243 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CD93Q9NPY3 652 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LZTFL1Q9NQ48 299 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ITM2CQ9NQX7 267 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FBXL12Q9NXK8 326 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ACTL7AQ9Y615 435 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CACNA1HO95180 2353 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 A0A0U1RQJ8 604 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PRR23AA6NEV1 266 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MIF4GDA9UHW6 222 aaKnown RBP11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 KPNA3O00505 521 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PPP1R12AO14974 1030 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RNASEH2AO75792 299 aaKnown RBP11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 BCKDHBP21953 392 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PLA2G5P39877 138 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 DHPSP49366 369 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RENBPP51606 427 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RWDD2BP57060 319 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 DYNLT1P63172 113 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CCDC173Q0VFZ6 552 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PLK5Q496M5 336 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PMS2CLQ68D20 193 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SLC9A4Q6AI14 798 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MFSD7Q6UXD7 560 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SPOCD1Q6ZMY3 1216 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 DPY19L3Q6ZPD9 716 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ARHGAP36Q6ZRI8 547 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 BZW1Q7L1Q6 419 aaKnown RBP11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RCOR2Q8IZ40 523 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 HDDC3Q8N4P3 179 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PAF1Q8N7H5 531 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 OR2A12Q8NGT7 310 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 EXD1Q8NHP7 514 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TOE1Q96GM8 510 aaKnown RBP11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FAM129BQ96TA1 746 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SGK2Q9HBY8 427 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SEPT3Q9UH03 358 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FZD4Q9ULV1 537 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PCDHA3Q9Y5H8 950 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 HEY1Q9Y5J3 304 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CAPN6Q9Y6Q1 641 aa11.18□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PLXNA2O75051 1894 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 C3orf70A6NLC5 250 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MEI4A8MW99 385 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 KRIT1O00522 736 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GFRA3O60609 400 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LEFTY1O75610 366 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MAP3K6O95382 1288 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 POP4O95707 220 aaKnown RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SEMA4FO95754 770 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FTCDO95954 541 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CD160O95971 181 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 IGLV3-19P01714 112 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TGM2P21980 687 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 HSPA9P38646 679 aaKnown RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GARSP41250 739 aaKnown RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 DPP6P42658 865 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MARCKSL1P49006 195 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 COPS2P61201 443 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GALNT2Q10471 571 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LBRQ14739 615 aaKnown RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GRM3Q14832 879 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PPP2R5EQ16537 467 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 POM121L1PQ3SYA9 428 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CFAP58Q5T655 872 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ATXN7L2Q5T6C5 722 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LYSMD4Q5XG99 296 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZNF662Q6ZS27 426 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ARMCX6Q7L4S7 300 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CYP2U1Q7Z449 544 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NT5DC3Q86UY8 548 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TP53INP2Q8IXH6 220 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TMEFF1Q8IYR6 380 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PQLC3Q8N755 202 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LRRC57Q8N9N7 239 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CHST14Q8NCH0 376 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CCNYQ8ND76 341 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TMIEQ8NEW7 156 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 OR6K2Q8NGY2 324 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 KRT35Q92764 455 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FOXJ1Q92949 421 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 HDAC11Q96DB2 347 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LRIG1Q96JA1 1093 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LOXL4Q96JB6 756 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PDLIM2Q96JY6 352 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZC3H10Q96K80 434 aaKnown RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 EXOC2Q96KP1 924 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GPR174Q9BXC1 333 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 OSBPL1AQ9BXW6 950 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms