RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 ZNF419Q96HQ0 510 aaPredicted RBP13.74□□□□□ -0.21
CTTN-201ENST00000301843 SNX27Q96L92 541 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 TRPV6Q9H1D0 765 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 CAAP1Q9H8G2 361 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 TRPC7Q9HCX4 862 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 TTC24A2A3L6 582 aaPredicted RBP13.74□□□□□ -0.21
CTTN-201ENST00000301843 CASQ2O14958 399 aaPredicted RBP13.74□□□□□ -0.21
CTTN-201ENST00000301843 PMPCBO75439 489 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 FYNP06241 537 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 PPARGP37231 505 aaPredicted RBP13.74□□□□□ -0.21
CTTN-201ENST00000301843 GRM5P41594 1212 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 GLUD2P49448 558 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 PDAP1Q13442 181 aaKnown RBP13.74□□□□□ -0.21
CTTN-201ENST00000301843 PTK2BQ14289 1009 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 PCSK7Q16549 785 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 FAM187BQ17R55 369 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 ZNF789Q5FWF6 425 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 FBXO48Q5FWF7 155 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 CNSTQ6PJW8 725 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 CLEC14AQ86T13 490 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 TMEM135Q86UB9 458 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 CPNE9Q8IYJ1 553 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 B3GALNT2Q8NCR0 500 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 PDCD6IPQ8WUM4 868 aaKnown RBP13.74□□□□□ -0.21
CTTN-201ENST00000301843 SNRNP27Q8WVK2 155 aaKnown RBP13.74□□□□□ -0.21
CTTN-201ENST00000301843 COQ10BQ9H8M1 238 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 FBRSL1Q9HCM7 1045 aaKnown RBP13.74□□□□□ -0.21
CTTN-201ENST00000301843 HSFX1Q9UBD0 423 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 RAP2CQ9Y3L5 183 aa13.74□□□□□ -0.21
CTTN-201ENST00000301843 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 ME2P23368 584 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 CSHL1Q14406 222 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 MTX3Q5HYI7 312 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 TTC16Q8NEE8 873 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 PPWD1Q96BP3 646 aaKnown RBP13.73□□□□□ -0.21
CTTN-201ENST00000301843 SLC29A1Q99808 456 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 TCAF2A6NFQ2 919 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 HACD1B0YJ81 288 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 DCLK1O15075 740 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 SEC24DO94855 1032 aaPredicted RBP13.73□□□□□ -0.21
CTTN-201ENST00000301843 ASLP04424 464 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 SETSIPP0DME0 302 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 MYL4P12829 197 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 ADRA1BP35368 520 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 RPL5P46777 297 aaKnown RBP13.73□□□□□ -0.21
CTTN-201ENST00000301843 GALK1P51570 392 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 COG7P83436 770 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 DPYSQ14117 519 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 ZNF484Q5JVG2 852 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 TSTD2Q5T7W7 516 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 LIPMQ5VYY2 423 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 CLEC6AQ6EIG7 209 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 C16orf89Q6UX73 402 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 STRADAQ7RTN6 431 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 ZC3HC1Q86WB0 502 aaKnown RBP13.73□□□□□ -0.21
CTTN-201ENST00000301843 TXNDC5Q8NBS9 432 aaKnown RBP13.73□□□□□ -0.21
CTTN-201ENST00000301843 ARRDC4Q8NCT1 418 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 RNF34Q969K3 372 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 DGCR14Q96DF8 476 aaKnown RBP13.73□□□□□ -0.21
CTTN-201ENST00000301843 ELMO2Q96JJ3 720 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 TSNARE1Q96NA8 513 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 SERPINI1Q99574 410 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 C16orf70Q9BSU1 422 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 GALNT8Q9NY28 637 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 PTGDR2Q9Y5Y4 395 aa13.73□□□□□ -0.21
CTTN-201ENST00000301843 FAM149AA5PLN7 773 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 TMX2-CTNND1H3BSU7 103 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 YWHAQP27348 245 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 MAP7Q14244 749 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 RBM20Q5T481 1227 aaKnown RBP13.72□□□□□ -0.21
CTTN-201ENST00000301843 PAQR9Q6ZVX9 377 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 CYS1Q717R9 158 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 CNTD1Q8N815 330 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 DRC3Q9H069 523 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 POMKQ9H5K3 350 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 ATP5BP06576 529 aaKnown RBP13.72□□□□□ -0.21
CTTN-201ENST00000301843 CYP2B6P20813 491 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 IREB2P48200 963 aaKnown RBP13.72□□□□□ -0.21
CTTN-201ENST00000301843 YBX1P67809 324 aaKnown RBP13.72□□□□□ -0.21
CTTN-201ENST00000301843 AGKQ53H12 422 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 LRRC8EQ6NSJ5 796 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 CLEC20AQ6ZU45 233 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 SH3RF2Q8TEC5 729 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 WNT8BQ93098 351 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 LRCH3Q96II8 777 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 NPY6RQ99463 290 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 C1QTNF1Q9BXJ1 281 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 NOL11Q9H8H0 719 aaKnown RBP13.72□□□□□ -0.21
CTTN-201ENST00000301843 IGSF9Q9P2J2 1179 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 CXCL11O14625 94 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 HUS1O60921 280 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 DDNO94850 711 aaPredicted RBP13.72□□□□□ -0.21
CTTN-201ENST00000301843 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.213e-9■□□□□ 8.3
CTTN-201ENST00000301843 SLC5A2P31639 672 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 TAS2R39P59534 338 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 PRAMEF19Q5SWL8 479 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
CTTN-201ENST00000301843 FAM43BQ6ZT52 329 aaPredicted RBP13.72□□□□□ -0.21
CTTN-201ENST00000301843 ERO1BQ86YB8 467 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms