RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 ACTRT2Q8TDY3 377 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 DPF3Q92784 378 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 MCMBPQ9BTE3 642 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 FICDQ9BVA6 458 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 ILKAPQ9H0C8 392 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-204ENST00000300862 ADAMTS6Q9UKP5 1117 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 POMPQ9Y244 141 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 SSX2IPQ9Y2D8 614 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 INPP5FQ9Y2H2 1132 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 MAGEB16A2A368 324 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 M0QZ92 97 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 CCNT2O60583 730 aaKnown RBP13.09□□□□□ -0.31
HIF3A-204ENST00000300862 MOCS2O96007 188 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-204ENST00000300862 CHRNA1P02708 482 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 SLC35E2BP0CK96 405 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 CHRNA4P43681 627 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 PGM2L1Q6PCE3 622 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 DCLRE1AQ6PJP8 1040 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 ARHGAP22Q7Z5H3 698 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 FSTL5Q8N475 847 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-204ENST00000300862 NCSTNQ92542 709 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 GPR22Q99680 433 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 SPATA16Q9BXB7 569 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 C1QTNF1Q9BXJ1 281 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 UBE2OQ9C0C9 1292 aaKnown RBP13.09□□□□□ -0.31
HIF3A-204ENST00000300862 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 GPAMQ9HCL2 828 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 DMAP1Q9NPF5 467 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-204ENST00000300862 ZDHHC2Q9UIJ5 367 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 PTCH2Q9Y6C5 1203 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 BUD23O43709 281 aaKnown RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 RNASEH1O60930 286 aaKnown RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 ITGB1P05556 798 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 MYL4P12829 197 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 CSE1LP55060 971 aaKnown RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 CNGA3Q16281 694 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 UPP1Q16831 310 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 GNASQ5JWF2 1037 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 FAM219BQ5XKK7 198 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 NXNQ6DKJ4 435 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 GDF6Q6KF10 455 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 ARHGAP12Q8IWW6 846 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 CENPLQ8N0S6 344 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 CCNYL1Q8N7R7 359 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 NXNL1Q96CM4 212 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 KIFC1Q9BW19 673 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 RHOJQ9H4E5 214 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 EBF3Q9H4W6 596 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 FAM96AQ9H5X1 160 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 MPP6Q9NZW5 540 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 TMEM233B4DJY2 109 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 AURKAO14965 403 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 PGK1P00558 417 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 ARNTP27540 789 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 PCSK1P29120 753 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 CRABP2P29373 138 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 NUDT2P50583 147 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 DYNC1I2Q13409 638 aaKnown RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 LSM12Q3MHD2 195 aaKnown RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 TBC1D25Q3MII6 688 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 FSCBQ5H9T9 825 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 INTS6LQ5JSJ4 861 aaKnown RBP13.08□□□□□ -0.32
HIF3A-204ENST00000300862 DHDDSQ86SQ9 333 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 SNX32Q86XE0 403 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 ATPAF2Q8N5M1 289 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 VAT1Q99536 393 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 TBL1YQ9BQ87 522 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 SLC39A8Q9C0K1 460 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 BRD8Q9H0E9 1235 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 XPR1Q9UBH6 696 aa13.08□□□□□ -0.32
HIF3A-204ENST00000300862 TMEM114B3SHH9 223 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 MATN2O00339 956 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 FKBP6O75344 327 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 PAGE1O75459 146 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 TFEBP19484 476 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 GLDCP23378 1020 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 PEX2P28328 305 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 ATXN3P54252 364 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-204ENST00000300862 DLG1Q12959 904 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 SEPT6Q14141 434 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 PCSK7Q16549 785 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 SFT2D3Q587I9 215 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 PKN3Q6P5Z2 889 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 ZYG11AQ6WRX3 759 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 TMC7Q7Z402 723 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 FBXW8Q8N3Y1 598 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 RNF148Q8N7C7 305 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 SREK1Q8WXA9 508 aaKnown RBP13.07□□□□□ -0.32
HIF3A-204ENST00000300862 CATSPER2Q96P56 530 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 CSNK1G1Q9HCP0 422 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 ARHGAP26Q9UNA1 814 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 TBC1D30Q9Y2I9 924 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 NEMP2A6NFY4 417 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms