RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 KPNA4O00629 521 aaPredicted RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 OR56A5P0C7T3 313 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 GDI2P50395 445 aaKnown RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 EPC2Q52LR7 807 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 PCNX4Q63HM2 1172 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 LRRC34Q8IZ02 419 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 QRFPRQ96P65 431 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 SMURF1Q9HCE7 757 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 RSL24D1Q9UHA3 163 aaKnown RBP12.2□□□□□ -0.46
PCF11-201ENST00000298281 DNAJC16Q9Y2G8 782 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 ZNF780BQ9Y6R6 833 aa12.2□□□□□ -0.46
PCF11-201ENST00000298281 RBAK-RBAKDNI3L0D1 243 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 INPP4BO15327 924 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 PLIN3O60664 434 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 RAMP2O60895 175 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 SEC24CP53992 1094 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 RIN1Q13671 783 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 ELOAQ14241 798 aaKnown RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 ACAP1Q15027 740 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 GLRA4Q5JXX5 417 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 EIF3MQ7L2H7 374 aaKnown RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 ABI3Q9P2A4 366 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 SEC22BO75396 215 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 CDK7P50613 346 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 DRG2P55039 364 aaKnown RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 AQP5P55064 265 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 MC1RQ01726 317 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 PPM1LQ5SGD2 360 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCF11-201ENST00000298281 FAXCQ5TGI0 409 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 CYB5D1Q6P9G0 228 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 OR10G6Q8NH81 332 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 ATL1Q8WXF7 558 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 ELMO1Q92556 727 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 SLC38A2Q96QD8 506 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 FICDQ9BVA6 458 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 CXorf56Q9H5V9 222 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 CISHQ9NSE2 258 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 BARX2Q9UMQ3 279 aaPredicted RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 ZCCHC11Q5TAX3 1644 aaKnown RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 DBTP11182 482 aaKnown RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 CNSTQ6PJW8 725 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 TSHZ1Q6ZSZ6 1077 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 ZC3H7AQ8IWR0 971 aaKnown RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 NOA1Q8NC60 698 aaKnown RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 TMEM168Q9H0V1 697 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 RNF121Q9H920 327 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 RBM22Q9NW64 420 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■□□□□ 10.6
PCF11-201ENST00000298281 TPRKBQ9Y3C4 175 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 CD163L1Q9NR16 1453 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 NAA20P61599 178 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 Q4G0T1 1027 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 SPOCD1Q6ZMY3 1216 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 STK40Q8N2I9 435 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 VAT1Q99536 393 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 CHID1Q9BWS9 393 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 TCF7L2Q9NQB0 619 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 MDFIC2A0A1B0GVS7 189 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 LOC110117498-PIK3R3F6TDL0 507 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 PLGP00747 810 aaPredicted RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 CYP2A6P11509 494 aaPredicted RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 CRATP43155 626 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 ARFIP1P53367 373 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 AGKQ53H12 422 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 SPANXN3Q5MJ09 141 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 ARMC8Q8IUR7 673 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 MYCBPAPQ8TBZ2 947 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 PIK3R3Q92569 461 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 MCCC1Q96RQ3 725 aaPredicted RBP12.19□□□□□ -0.46
PCF11-201ENST00000298281 MROH7Q68CQ1 1323 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 SGPL1O95470 568 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 GP5P40197 560 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 SP140Q13342 867 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 PKN1Q16512 942 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 SERPINB11Q96P15 392 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 PCDHB5Q9Y5E4 795 aa12.19□□□□□ -0.46
PCF11-201ENST00000298281 ALKQ9UM73 1620 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 TOP3BO95985 862 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 ALAS2P22557 587 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 LPCAT2Q7L5N7 544 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 P4HA3Q7Z4N8 544 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CXorf40AQ8TE69 158 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CASKIN2Q8WXE0 1202 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ANKRD7Q92527 254 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 MRPL9Q9BYD2 267 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 MMADHCQ9H3L0 296 aaPredicted RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 SIN3BO75182 1162 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 POMCP01189 267 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 DNTTP04053 509 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 PTPN4P29074 926 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CAPZA1P52907 286 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 TROAPQ12815 778 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 TIMM50Q3ZCQ8 353 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 RNASE12Q5GAN4 147 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 PDPK2PQ6A1A2 396 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 METTL7BQ6UX53 244 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CXXC5Q7LFL8 322 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms