RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 SLC45A3Q96JT2 553 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 PAAF1Q9BRP4 392 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 S100A14Q9HCY8 104 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 FZD10Q9ULW2 581 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 USP3Q9Y6I4 520 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 XIRP2A4UGR9 3374 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 CDH23Q9H251 3354 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 DNAJC25-GNG10A0A024R161 153 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 SMIM28A0A1B0GU29 152 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 EEF2KO00418 725 aaKnown RBP13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 ZNF195O14628 629 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 UBL4AP11441 157 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 ENO3P13929 434 aaPredicted RBP13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 SMPD1P17405 629 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 NAGLUP54802 743 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 BST2Q10589 180 aaKnown RBP13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 LAPTM5Q13571 262 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 POU6F1Q14863 301 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 BEND5Q7L4P6 421 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 NET1Q7Z628 596 aaPredicted RBP13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 ARHGAP24Q8N264 748 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 CCNYL1Q8N7R7 359 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 MCUQ8NE86 351 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 CDKL2Q92772 493 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 GBP5Q96PP8 586 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 TUBB6Q9BUF5 446 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 VCXQ9H320 206 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 FANCFQ9NPI8 374 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 CIDEBQ9UHD4 219 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 PCDHGB3Q9Y5G1 929 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 A0A0G2JLL6 359 aaPredicted RBP13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 GAS2O43903 313 aaKnown RBP13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 PEX1O43933 1283 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 JCHAINP01591 159 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 C2P06681 752 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 NCAM1P13591 858 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 PRRT2Q7Z6L0 340 aaPredicted RBP13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 ANKRD52Q8NB46 1076 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 KCTD4Q8WVF5 259 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 LPPQ93052 612 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 TASP1Q9H6P5 420 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 CYP4F12Q9HCS2 524 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 ANGPTL2Q9UKU9 493 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 AURKAO14965 403 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 HNRNPCL1O60812 293 aaKnown RBP13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 GLRA3O75311 464 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 SERPINE1P05121 402 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 ATP6V1B1P15313 513 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 NFKB1P19838 968 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 TKTL1P51854 596 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 BTKQ06187 659 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 SATL1Q86VE3 508 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 BRSK1Q8TDC3 778 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 CGREF1Q99674 301 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 NDFIP2Q9NV92 336 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 ATAD3AQ9NVI7 634 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 GMPR2Q9P2T1 348 aaKnown RBP13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 APPL1Q9UKG1 709 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
KCNIP3-201ENST00000295225 PFDN1O60925 122 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 HNRNPLP14866 589 aaKnown RBP eCLIP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 TPSB2P20231 275 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 CD68P34810 354 aaPredicted RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 MPP1Q00013 466 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 GRM3Q14832 879 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 TPSAB1Q15661 275 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 TRMT5Q32P41 509 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 RWDD4Q6NW29 188 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 SLC26A9Q7LBE3 791 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 ERO1BQ86YB8 467 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 TDRD5Q8NAT2 981 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 OR6Y1Q8NGX8 325 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 NMD3Q96D46 503 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 TMA16Q96EY4 203 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 DNAJC1Q96KC8 554 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 OLFM3Q96PB7 478 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 PSKH2Q96QS6 385 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 GATA5Q9BWX5 397 aaPredicted RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 ULBP1Q9BZM6 244 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 VRTNQ9H8Y1 702 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 GRXCR2A6NFK2 248 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 C9IYK1 514 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 C9JVG2 144 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 POLBP06746 335 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 TSHRP16473 764 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 PGAM1P18669 254 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 FGFR3P22607 806 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 PTPN3P26045 913 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 ETV3P41162 512 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 MATKP42679 507 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 GJA9P57773 515 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 BEX3Q00994 111 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 NEPROQ6NW34 567 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 LRRC8BQ6P9F7 803 aa13.46□□□□□ -0.25
KCNIP3-201ENST00000295225 SLC2A7Q6PXP3 512 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms