RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CHST14Q8NCH0 376 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 FATE1Q969F0 183 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 FAM131CQ96AQ9 280 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 HEPHQ9BQS7 1158 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 LHX3Q9UBR4 397 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 IL36AQ9UHA7 158 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 MID1O15344 667 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 IL1BP01584 269 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 MX2P20592 715 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 PSMD8P48556 350 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 CCNHP51946 323 aaPredicted RBP27.34■■□□□ 1.97
SSU72-201ENST00000291386 RWDD2BP57060 319 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 RHOAP61586 193 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 GBE1Q04446 702 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 SLC10A2Q12908 348 aaPredicted RBP27.34■■□□□ 1.97
SSU72-201ENST00000291386 TFDP2Q14188 446 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 PMS2CLQ68D20 193 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 RFX6Q8HWS3 928 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 PIP4K2CQ8TBX8 421 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 LRIG1Q96JA1 1093 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 TSGA13Q96PP4 275 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 TM6SF2Q9BZW4 377 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 DTLQ9NZJ0 730 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 SARDHQ9UL12 918 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 SMG5Q9UPR3 1016 aaKnown RBP27.34■■□□□ 1.97
SSU72-201ENST00000291386 WASF2Q9Y6W5 498 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 ABCA7Q8IZY2 2146 aa27.34■■□□□ 1.97
SSU72-201ENST00000291386 hCG_1818297A0A087WSY0 165 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 RHOBTB1O94844 696 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 DNA2P51530 1060 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 PRR23BQ6ZRT6 265 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 VOPP1Q96AW1 172 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 HES6Q96HZ4 224 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 LOXL4Q96JB6 756 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 GDAP1L1Q96MZ0 367 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 LZTFL1Q9NQ48 299 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 FBXL12Q9NXK8 326 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 RAB23Q9ULC3 237 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 FZD4Q9ULV1 537 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 NCKAP1Q9Y2A7 1128 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 EFR3BQ9Y2G0 817 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 CEP192Q8TEP8 1941 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 THADAQ6YHU6 1953 aa27.33■■□□□ 1.97
SSU72-201ENST00000291386 SHROOM3Q8TF72 1996 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 POP4O95707 220 aaKnown RBP27.32■■□□□ 1.96
SSU72-201ENST00000291386 IGSF6O95976 241 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 CCNCP24863 283 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 PTPN7P35236 360 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 CSNK1DP48730 415 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 NSUN2Q08J23 767 aaKnown RBP eCLIP27.32■■□□□ 1.96
SSU72-201ENST00000291386 LBRQ14739 615 aaKnown RBP27.32■■□□□ 1.96
SSU72-201ENST00000291386 ELF2Q15723 593 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 MYLK3Q32MK0 819 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 LAIR1Q6GTX8 287 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 TIGD7Q6NT04 549 aaPredicted RBP27.32■■□□□ 1.96
SSU72-201ENST00000291386 AADATQ8N5Z0 425 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 UBL4BQ8N7F7 174 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 ALG3Q92685 438 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 HDAC11Q96DB2 347 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 TOE1Q96GM8 510 aaKnown RBP27.32■■□□□ 1.96
SSU72-201ENST00000291386 SGK2Q9HBY8 427 aa27.32■■□□□ 1.96
SSU72-201ENST00000291386 DDX3YO15523 660 aaKnown RBP27.31■■□□□ 1.96
SSU72-201ENST00000291386 MAP3K13O43283 966 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 LEFTY1O75610 366 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 FTCDO95954 541 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 KRT10P13645 584 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 DRD3P35462 400 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 NR2C2P49116 596 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 RENBPP51606 427 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 ZNF33AQ06730 810 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 CCDC173Q0VFZ6 552 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 LPCAT2Q7L5N7 544 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 CCDC50Q8IVM0 306 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 ZNF830Q96NB3 372 aaPredicted RBP27.31■■□□□ 1.96
SSU72-201ENST00000291386 PSKH2Q96QS6 385 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 CINPQ9BW66 212 aaPredicted RBP27.31■■□□□ 1.96
SSU72-201ENST00000291386 SEPT3Q9UH03 358 aa27.31■■□□□ 1.96
SSU72-201ENST00000291386 DMDP11532 3685 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 A0A1W2PP55 124 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 SLC7A4O43246 635 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 CST8O60676 142 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 TGM2P21980 687 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 HSPA9P38646 679 aaKnown RBP27.3■■□□□ 1.96
SSU72-201ENST00000291386 SLC10A7Q0GE19 358 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 HNRNPDQ14103 355 aaKnown RBP27.3■■□□□ 1.96
SSU72-201ENST00000291386 ARSIQ5FYB1 569 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 TEX26Q8N6G2 289 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 CADM4Q8NFZ8 388 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 NSMCE1Q8WV22 266 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 MAML1Q92585 1016 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 OLFM3Q96PB7 478 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 OMDQ99983 421 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 CPEB1Q9BZB8 566 aaKnown RBP27.3■■□□□ 1.96
SSU72-201ENST00000291386 BTBD1Q9H0C5 482 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 PCED1AQ9H1Q7 454 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 NEUROG2Q9H2A3 272 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 SERGEFQ9UGK8 458 aa27.3■■□□□ 1.96
SSU72-201ENST00000291386 PRR23AA6NEV1 266 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 MATN3O15232 486 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 NDUFS2O75306 463 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms