RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 HBS1LQ9Y450 684 aaKnown RBP15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 FUT2Q10981 343 aa15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 TSNQ15631 228 aaKnown RBP15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 PCID2Q5JVF3 399 aa15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 LDLRAP1Q5SW96 308 aa15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 NEPROQ6NW34 567 aa15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 SPATC1LQ9H0A9 340 aa15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 XPR1Q9UBH6 696 aa15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 NR2E1Q9Y466 385 aa15.51■□□□□ 0.07
SHROOM4-201ENST00000289292 UMODL1Q5DID0 1318 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 RGS14O43566 566 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 LRG1P02750 347 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 MAGP20916 626 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 CDH3P22223 829 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 IDH2P48735 452 aaKnown RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ANKRD13AQ8IZ07 590 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 RSPH1Q8WYR4 309 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 MCRS1Q96EZ8 462 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 PRKD2Q9BZL6 878 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 OR12D3Q9UGF7 316 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 SCAMP3O14828 347 aaKnown RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 IDH3BO43837 385 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 TALDO1P37837 337 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 CAPZA2P47755 286 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 RENBPP51606 427 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 MAD2L1Q13257 205 aaPredicted RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 FAM182AQ5T1J6 154 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 MFSD4BQ5TF39 518 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 OVOS1Q6IE37 1185 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ZPBP2Q6X784 338 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ARHGAP36Q6ZRI8 547 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ARCQ7LC44 396 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 NIPA1Q7RTP0 329 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 DNERQ8NFT8 737 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 WDR36Q8NI36 951 aaKnown RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 RP9Q8TA86 221 aaKnown RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 COPS5Q92905 334 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 SMPD4Q9NXE4 827 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 TOR4AQ9NXH8 423 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ZNF624Q9P2J8 865 aaPredicted RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 DMTF1Q9Y222 760 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 TDRKHQ9Y2W6 561 aaKnown RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 CLDN5O00501 218 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 MYL12BO14950 172 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 VPS4BO75351 444 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 PIRTP0C851 137 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 TFEBP19484 476 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 S100A3P33764 101 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ALDH7A1P49419 539 aaKnown RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 RAD21L1Q9H4I0 556 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ATP13A1Q9HD20 1204 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 FAM198AQ9UFP1 575 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ADAM30Q9UKF2 790 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 JCADQ9P266 1359 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 PACS1Q6VY07 963 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 OR52K2Q8NGK3 314 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 KRCC1Q9NPI7 259 aaPredicted RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ADPRHL2Q9NX46 363 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 SORCS3Q9UPU3 1222 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 DGKBQ9Y6T7 804 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 TPD52L2O43399 206 aaKnown RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 IFNA14P01570 189 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 CETPP11597 493 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 MAGEA10P43363 369 aaPredicted RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 RAB10P61026 200 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 TRIM71Q2Q1W2 868 aaKnown RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 SLC39A12Q504Y0 691 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 PPM1JQ5JR12 505 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 LIPMQ5VYY2 423 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 SYT12Q8IV01 421 aa15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 ACE2Q9BYF1 805 aaPredicted RBP15.5■□□□□ 0.07
SHROOM4-201ENST00000289292 SMIM31A0A1B0GVY4 71 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 BPGMP07738 259 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 CNPP09543 421 aaKnown RBP15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 MSH3P20585 1137 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 MAXP61244 160 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 ANKRD22Q5VYY1 191 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 SLC27A1Q6PCB7 646 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 ZNF540Q8NDQ6 660 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 REXO5Q96IC2 774 aaKnown RBP15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 TLR8Q9NR97 1041 aaKnown RBP15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 RPTORQ8N122 1335 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 BIRC5O15392 142 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 TSPAN19P0C672 248 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 COX7A2P14406 83 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 ATP12AP54707 1039 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 KHDC1Q4VXA5 237 aaKnown RBP15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 SATL1Q86VE3 508 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 PGBD3Q8N328 593 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 COLEC11Q9BWP8 271 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 PNPLA3Q9NST1 481 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 CDH22Q9UJ99 828 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 RAP2CQ9Y3L5 183 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 TTLL13PA6NNM8 815 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 MAP3K13O43283 966 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 PPP1R11O60927 126 aaPredicted RBP15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 SEC24AO95486 1093 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 HOXD10P28358 340 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms