RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ARSIQ5FYB1 569 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 PMS2CLQ68D20 193 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 SPOCD1Q6ZMY3 1216 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 PLPP6Q8IY26 295 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 RNF10Q8N5U6 811 aaKnown RBP20.2■□□□□ 0.82
TIMP4-201ENST00000287814 OR2AP1Q8NGE2 309 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 ALG3Q92685 438 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 FAM122AQ96E09 287 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 NEUROG2Q9H2A3 272 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 LZTFL1Q9NQ48 299 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 DTLQ9NZJ0 730 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 PACSIN2Q9UNF0 486 aaPredicted RBP20.2■□□□□ 0.82
TIMP4-201ENST00000287814 FARP1Q9Y4F1 1045 aaPredicted RBP20.2■□□□□ 0.82
TIMP4-201ENST00000287814 LEFTY1O75610 366 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 C5AR1P21730 350 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 CTNNA2P26232 953 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 RHOAP61586 193 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 ODF2Q5BJF6 829 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 NPNTQ6UXI9 565 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 ZNF662Q6ZS27 426 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 DSG4Q86SJ6 1040 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 RCOR2Q8IZ40 523 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 TSEN2Q8NCE0 465 aaKnown RBP20.19■□□□□ 0.82
TIMP4-201ENST00000287814 GRIN3AQ8TCU5 1115 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 EXOC2Q96KP1 924 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 CCDC114Q96M63 670 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 HEPHQ9BQS7 1158 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 TSGA10Q9BZW7 698 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 IL36AQ9UHA7 158 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 SCML1Q9UN30 329 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 PPP2R2CQ9Y2T4 447 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 KRT86O43790 486 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 ADH1BP00325 375 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 GSRP00390 522 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 GARSP41250 739 aaKnown RBP20.19■□□□□ 0.82
TIMP4-201ENST00000287814 PTGER3P43115 390 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 RGRP47804 291 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 RPL6Q02878 288 aaKnown RBP20.19■□□□□ 0.82
TIMP4-201ENST00000287814 SLC10A7Q0GE19 358 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 MYLK3Q32MK0 819 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 TTC31Q49AM3 519 aaPredicted RBP20.19■□□□□ 0.82
TIMP4-201ENST00000287814 SLC36A4Q6YBV0 504 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 PEX26Q7Z412 305 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 RFX6Q8HWS3 928 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 HDDC3Q8N4P3 179 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 ATPAF2Q8N5M1 289 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 TMIEQ8NEW7 156 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 EXD1Q8NHP7 514 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 GANCQ8TET4 914 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 MAK16Q9BXY0 300 aaKnown RBP20.19■□□□□ 0.82
TIMP4-201ENST00000287814 RAB23Q9ULC3 237 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.19■□□□□ 0.825e-10■■■■□ 22
TIMP4-201ENST00000287814 PLXND1Q9Y4D7 1925 aa20.19■□□□□ 0.82
TIMP4-201ENST00000287814 NUMA1Q14980 2115 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 APOL1O14791 398 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 MUSKO15146 869 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 INSIG1O15503 277 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 NRDCO43847 1150 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 RNASEH2AO75792 299 aaKnown RBP20.18■□□□□ 0.82
TIMP4-201ENST00000287814 OXTRP30559 389 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 SNRPD1P62314 119 aaKnown RBP20.18■□□□□ 0.82
TIMP4-201ENST00000287814 DYNLT1P63172 113 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 KAZNQ674X7 775 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 USP30Q70CQ3 517 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 C11orf74Q86VG3 221 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 SLC41A1Q8IVJ1 513 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 RYBPQ8N488 228 aaPredicted RBP20.18■□□□□ 0.82
TIMP4-201ENST00000287814 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.18■□□□□ 0.82
TIMP4-201ENST00000287814 ARRDC3Q96B67 414 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 ZNF419Q96HQ0 510 aaPredicted RBP20.18■□□□□ 0.82
TIMP4-201ENST00000287814 OMDQ99983 421 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 HERPUD2Q9BSE4 406 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 GPR174Q9BXC1 333 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 ZDHHC6Q9H6R6 413 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 EVLQ9UI08 416 aaPredicted RBP20.18■□□□□ 0.82
TIMP4-201ENST00000287814 AMFRQ9UKV5 643 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 HEY1Q9Y5J3 304 aa20.18■□□□□ 0.82
TIMP4-201ENST00000287814 hCG_1818297A0A087WSY0 165 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 CCDC66A2RUB6 948 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 KPNA3O00505 521 aaPredicted RBP20.17■□□□□ 0.82
TIMP4-201ENST00000287814 KRIT1O00522 736 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 DDX3YO15523 660 aaKnown RBP20.17■□□□□ 0.82
TIMP4-201ENST00000287814 RHOBTB1O94844 696 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 PRNPP04156 253 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 PTMAP06454 111 aaKnown RBP20.17■□□□□ 0.82
TIMP4-201ENST00000287814 CNTN1Q12860 1018 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 LBRQ14739 615 aaKnown RBP20.17■□□□□ 0.82
TIMP4-201ENST00000287814 ELF2Q15723 593 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 TFDP3Q5H9I0 405 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 FAM46CQ5VWP2 391 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 LAIR1Q6GTX8 287 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 AADACL2Q6P093 401 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 ARMCX6Q7L4S7 300 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 LPCAT2Q7L5N7 544 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 SYCE1Q8N0S2 351 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 DCLK2Q8N568 766 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 FAM131CQ96AQ9 280 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 BTBD1Q9H0C5 482 aa20.17■□□□□ 0.82
TIMP4-201ENST00000287814 SAE1Q9UBE0 346 aaPredicted RBP20.17■□□□□ 0.82
TIMP4-201ENST00000287814 OTOGLQ3ZCN5 2332 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms