RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SERGEFQ9UGK8 458 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 EVLQ9UI08 416 aaPredicted RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 IPO11Q9UI26 975 aaKnown RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 GUCA1BQ9UMX6 200 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 SCML1Q9UN30 329 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 HEY1Q9Y5J3 304 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ALG6Q9Y672 507 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 DUSP10Q9Y6W6 482 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CUL9Q8IWT3 2517 aa6.65□□□□□ -1.35
CD44-204ENST00000279452 A0A0C4DFX4 3053 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 MYOFQ9NZM1 2061 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3DA0A087WVF3 549 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3IA0A087WXS9 549 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3EA0A087X179 549 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3KA0A087X1G2 549 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 A0A0U1RQJ8 604 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3FA6NER0 549 aaPredicted RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 LRRC72A6NJI9 287 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3LB9A6J9 549 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 NEMP1O14524 444 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 MCF2LO15068 1137 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 ALOX15BO15296 676 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 KRT86O43790 486 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 PRAMEF11O60813 436 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 LEFTY1O75610 366 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 EPN2O95208 641 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 FTCDO95954 541 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 GSRP00390 522 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 UGT2B4P06133 528 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 CTSLP07711 333 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 RETP07949 1114 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3HP0C7X1 549 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 XPAP23025 273 aaPredicted RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 ITPKAP23677 461 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 CTNNA2P26232 953 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 MAOBP27338 520 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 ACSL1P33121 698 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 CETN2P41208 172 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 MARCKSL1P49006 195 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 METAP1P53582 386 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 HADHBP55084 474 aaKnown RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 ZNF33AQ06730 810 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 IL10RBQ08334 325 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 CCDC15Q0P6D6 951 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 CNTN1Q12860 1018 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 LBRQ14739 615 aaKnown RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 TCEAL1Q15170 157 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 AASDHQ4L235 1098 aaPredicted RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 WDR45BQ5MNZ6 344 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TMCO4Q5TGY1 634 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 LRRC38Q5VT99 294 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 DCAF12L1Q5VU92 463 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3GQ6DHY5 549 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3CQ6IPX1 549 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 FBXL19Q6PCT2 694 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 NCEH1Q6PIU2 408 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 USP30Q70CQ3 517 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 ARHGAP12Q8IWW6 846 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 KIAA2013Q8IYS2 634 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TBC1D3Q8IZP1 549 aaPredicted RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 SYCE1Q8N0S2 351 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 AADATQ8N5Z0 425 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 PCDH19Q8TAB3 1148 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 PDCD6IPQ8WUM4 868 aaKnown RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 LRRN4Q8WUT4 740 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 TSC1Q92574 1164 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 FOXJ1Q92949 421 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 HAUS1Q96CS2 278 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 RBM41Q96IZ5 413 aaKnown RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 ZC3H10Q96K80 434 aaKnown RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 CALR3Q96L12 384 aaKnown RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 ALS2CR12Q96Q35 445 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 NEUROG2Q9H2A3 272 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 C6orf106Q9H6K1 298 aaPredicted RBP6.64□□□□□ -1.35
CD44-204ENST00000279452 SGK2Q9HBY8 427 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 HAUS2Q9NVX0 235 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 SEPT10Q9P0V9 454 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 SALL4Q9UJQ4 1053 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 AMFRQ9UKV5 643 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 SARDHQ9UL12 918 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 FZD4Q9ULV1 537 aa6.64□□□□□ -1.35
CD44-204ENST00000279452 CCDC66A2RUB6 948 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 GRID2IPA4D2P6 1211 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 BTNL10A8MVZ5 291 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 PJA2O43164 708 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 PCDH8O95206 1070 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 ZRANB2O95218 330 aaKnown RBP eCLIP6.63□□□□□ -1.35
CD44-204ENST00000279452 PIGNO95427 931 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 POP4O95707 220 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 KRT10P13645 584 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 GNSP15586 552 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 ZFXP17010 805 aaPredicted RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 MX2P20592 715 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 IL4RP24394 825 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 SERPINA4P29622 427 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 MAT2AP31153 395 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 CTNNA1P35221 906 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 GARSP41250 739 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 MMP13P45452 471 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 VASPP50552 380 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms