RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KDM3AQ9Y4C1 1321 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ARPC4-TTLL3A0A0A6YYG9 625 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 A0A0A6YYJ9 748 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 LRRD1A4D1F6 860 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ZSCAN5CA6NGD5 496 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 NPIPB15A6NHN6 443 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 DNM1LO00429 736 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 PRRG2O14669 202 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ZNF263O14978 683 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 DNPH1O43598 174 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 OPHN1O60890 802 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 DDHD2O94830 711 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 GLP2RO95838 553 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 PFKMP08237 780 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 MYBL1P10243 752 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 TYMPP19971 482 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 PTAFRP25105 342 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 NFKBIAP25963 317 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 GGT5P36269 586 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 BMPR1AP36894 532 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 IL15P40933 162 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 SKIV2L2P42285 1042 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 MTIF2P46199 727 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 HARS2P49590 506 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 LUMP51884 338 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 POLGP54098 1239 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 BPIFB4P59827 614 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 GMFBP60983 142 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ATP8B2P98198 1209 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 RALGDSQ12967 914 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 PTP4A2Q12974 167 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 AIMP2Q13155 320 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 SP140Q13342 867 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ITGA7Q13683 1181 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 NFYCQ13952 458 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 CAMK1Q14012 370 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 RNF151Q2KHN1 245 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 TWISTNBQ3B726 338 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 CCDC40Q4G0X9 1142 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 BOLA3Q53S33 107 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 HSP90AA5PQ58FG0 334 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 DRICH1Q6PGQ1 229 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 USP17L6PQ6QN14 398 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 LARP4Q71RC2 724 aaKnown RBP eCLIP4.76□□□□□ -1.65
CD44-202ENST00000278385 RAB11FIP2Q7L804 512 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 OTOAQ7RTW8 1153 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ADGRG6Q86SQ4 1221 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 TMEM200AQ86VY9 491 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 GLB1L2Q8IW92 636 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 GPC2Q8N158 579 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 LRRC43Q8N309 656 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 TTC9BQ8N6N2 239 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 PLA2G15Q8NCC3 412 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 SHCBP1Q8NEM2 672 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 BRIX1Q8TDN6 353 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 GAB3Q8WWW8 586 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 MR1Q95460 341 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 SLC22A18Q96BI1 424 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 TUBGCP3Q96CW5 907 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 MRGPRX4Q96LA9 322 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 RBM14Q96PK6 669 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 OR14A2Q96R54 314 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ABHD1Q96SE0 405 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 AGAP2Q99490 1192 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 VRK1Q99986 396 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 KLHL4Q9C0H6 718 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 SLC25A18Q9H1K4 315 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 EPC1Q9H2F5 836 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ST6GALNAC4Q9H4F1 302 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 WDCPQ9H6R7 721 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 KIAA1551Q9HCM1 1747 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ZNF304Q9HCX3 659 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 IL1RAPL2Q9NP60 686 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 CD93Q9NPY3 652 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 PFDN4Q9NQP4 134 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 POLE3Q9NRF9 147 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ZDHHC7Q9NXF8 308 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 DDX43Q9NXZ2 648 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 NCDNQ9UBB6 729 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ZNF212Q9UDV6 495 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 HACL1Q9UJ83 578 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 ZFR2Q9UPR6 939 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 AURKCQ9UQB9 309 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 NOSIPQ9Y314 301 aaKnown RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 FPGT-TNNI3KV9GXZ4 949 aa4.76□□□□□ -1.65
CD44-202ENST00000278385 N4BP2Q86UW6 1770 aaPredicted RBP4.76□□□□□ -1.65
CD44-202ENST00000278385 ABCC4O15439 1325 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 ATP8B3O60423 1300 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 hCG_1809904A0A1W2PP81 198 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 A0A1W2PPE2 198 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 A0A1W2PR64 198 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 URADA6NGE7 173 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 FAM171A2A8MVW0 826 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 GPR89AB7ZAQ6 455 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 STX16-NPEPL1H3BU86 382 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 BTN3A1O00481 513 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 STX16O14662 325 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 NRP1O14786 923 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms