RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 AMHP03971 560 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 LYNP07948 512 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 FOSL2P15408 326 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 PTPN1P18031 435 aaKnown RBP13.12□□□□□ -0.31
C9orf3-201ENST00000277198 ERCC2P18074 760 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 LRPAP1P30533 357 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 ARRB2P32121 409 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 SERPINB6P35237 376 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 POLD2P49005 469 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 SLC30A9Q6PML9 568 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 FBXW8Q8N3Y1 598 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 OR52K1Q8NGK4 314 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 PIP4K2CQ8TBX8 421 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-201ENST00000277198 COG4Q9H9E3 785 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 NMRAL1Q9HBL8 299 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 CNGB3Q9NQW8 809 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 PRPF19Q9UMS4 504 aaKnown RBP13.12□□□□□ -0.31
C9orf3-201ENST00000277198 M0QZ92 97 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 CASQ2O14958 399 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-201ENST00000277198 THRAP10827 490 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 COL6A2P12110 1019 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 COX4I1P13073 169 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 GLDCP23378 1020 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 GATMP50440 423 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 CSRP3P50461 194 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 MTTPP55157 894 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 ASPHQ12797 758 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 MPP3Q13368 585 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 CLEC20AQ6ZU45 233 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 ACAD11Q709F0 780 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 SETD3Q86TU7 594 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-201ENST00000277198 PDSS2Q86YH6 399 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 KLHDC8BQ8IXV7 354 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 DNAAF3Q8N9W5 541 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 URGCPQ8TCY9 931 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 TOP1MTQ969P6 601 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 RAD9AQ99638 391 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 ILKAPQ9H0C8 392 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-201ENST00000277198 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 PIGVQ9NUD9 493 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 OXSMQ9NWU1 459 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 FBXW11Q9UKB1 542 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 POMPQ9Y244 141 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-201ENST00000277198 LINC01553A4QN01 128 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 MEI4A8MW99 385 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 EFCAB14O75071 495 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 C2P06681 752 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 NCF2P19878 526 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 ITGAXP20702 1163 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 AKAP5P24588 427 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PEX19P40855 299 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 CLCN2P51788 898 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 TPI1P60174 286 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 GALNT2Q10471 571 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 KLF10Q13118 480 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 SYPL2Q5VXT5 272 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 NAPEPLDQ6IQ20 393 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 ATG14Q6ZNE5 492 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 CMC1Q7Z7K0 106 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 LINC00523Q86TU6 105 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 TMEM126BQ8IUX1 230 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 GALNT15Q8N3T1 639 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 MAFAQ8NHW3 353 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 SERPINI1Q99574 410 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 GORASP1Q9BQQ3 440 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 KLHL4Q9C0H6 718 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 WDR6Q9NNW5 1121 aaKnown RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PAPOLBQ9NRJ5 636 aaKnown RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 VTI1BQ9UEU0 232 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 BCAP29Q9UHQ4 241 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 VPS28Q9UK41 221 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 ST3GAL5Q9UNP4 418 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 RAP2CQ9Y3L5 183 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 COL4A6Q14031 1691 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 F5H423 210 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 KCNK1O00180 336 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 MATN2O00339 956 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 FAM200BP0CF97 657 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 TKTL1P51854 596 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PITX1P78337 314 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 HTRA4P83105 476 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 ROR2Q01974 943 aaKnown RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 NME3Q13232 169 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 CCNIQ14094 377 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PRPSAP1Q14558 356 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 ANO4Q32M45 955 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 RALGPS1Q5JS13 557 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 KBTBD6Q86V97 674 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 KCNMB4Q86W47 210 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 OSTM1Q86WC4 334 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 DEFB107AQ8IZN7 70 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 POU5F2Q8N7G0 328 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 SLC26A7Q8TE54 656 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 GDPD5Q8WTR4 605 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms