RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ERP27Q96DN0 273 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 LMAN2LQ9H0V9 348 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 IL1RL2Q9HB29 575 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 NDUFAF4Q9P032 175 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 AK5Q9Y6K8 562 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 TPRP12270 2363 aaKnown RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 CACNB4O00305 520 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 IRAK1P51617 712 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 PITRM1Q5JRX3 1037 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 EPS8L1Q8TE68 723 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 SLC28A1O00337 649 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 SRGNP10124 158 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 NR1H2P55055 460 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ENPEPQ07075 957 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ACSM2AQ08AH3 577 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ACSM2BQ68CK6 577 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 PGBD2Q6P3X8 592 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 DNAAF5Q86Y56 855 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 H3BRB1 525 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 CDK7P50613 346 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 LPIN1Q14693 890 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 SULT1C3Q6IMI6 304 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ACAD10Q6JQN1 1059 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 IZUMO2Q6UXV1 221 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ZNF671Q8TAW3 534 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 TUT1Q9H6E5 874 aaKnown RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 PCDH18Q9HCL0 1135 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 TRNAU1APQ9NX07 287 aaKnown RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ERVK-7P63135 1459 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 CD151P48509 253 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 VAC14Q08AM6 782 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 INO80DQ53TQ3 878 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 TMEM260Q9NX78 707 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ARL15Q9NXU5 204 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 PDHBP11177 359 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 CHN2P52757 468 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ATXN7L2Q5T6C5 722 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 GAL3ST3Q96A11 431 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 TUBGCP5Q96RT8 1024 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 C3orf14Q9HBI5 128 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ZNF214Q9UL59 606 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 DUSP12Q9UNI6 340 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 IRGMA1A4Y4 181 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 TRIM3O75382 744 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 FASP25445 335 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 TRAF2Q12933 501 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 TMEM26Q6ZUK4 368 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 FBXO39Q8N4B4 442 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 VCPIP1Q96JH7 1222 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 H2AFXP16104 143 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 NECAB2Q7Z6G3 386 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 SLC9A8Q9Y2E8 581 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 TBC1D30Q9Y2I9 924 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 HACD1B0YJ81 288 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 MROH9Q5TGP6 573 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 OR5J2Q8NH18 312 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 GPN1Q9HCN4 374 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 ATP13A1Q9HD20 1204 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 NT5MQ9NPB1 228 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 CKLFQ9UBR5 152 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 PPIEQ9UNP9 301 aaKnown RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 G3V2T6 193 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 ERP29P30040 261 aaKnown RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 RPP38P78345 283 aaKnown RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 CLCA4Q14CN2 919 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 RD3Q7Z3Z2 195 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 DSELQ8IZU8 1212 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 LRRC71Q8N4P6 559 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 DRAXINQ8NBI3 349 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 NUAK2Q9H093 628 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 BARX2Q9UMQ3 279 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 ATP6V1B2P21281 511 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 WEE1P30291 646 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 MGAT5Q09328 741 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 FMR1NBQ8N0W7 255 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 ZKSCAN4Q969J2 545 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 ARL5BQ96KC2 179 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 NSMCE2Q96MF7 247 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 KCTD14Q9BQ13 255 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 ABCG8Q9H221 673 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 RPS6KA6Q9UK32 745 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 PDPK1O15530 556 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 TYMPP19971 482 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 SLC34A1Q06495 639 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 COTL1Q14019 142 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 GALNT3Q14435 633 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 TEAD4Q15561 434 aa13.4□□□□□ -0.26
PRDM16-201ENST00000270722 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
PRDM16-201ENST00000270722 FTH1P02794 183 aa13.4□□□□□ -0.27
PRDM16-201ENST00000270722 SQLEQ14534 574 aa13.4□□□□□ -0.27
PRDM16-201ENST00000270722 MIIPQ5JXC2 388 aa13.4□□□□□ -0.27
PRDM16-201ENST00000270722 NDNQ99608 321 aa13.4□□□□□ -0.27
PRDM16-201ENST00000270722 CBWD1Q9BRT8 395 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms