RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 WNT3AP56704 352 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 MAXP61244 160 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 DSC2Q02487 901 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 ARMC3Q5W041 872 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 RNF219Q5W0B1 726 aaPredicted RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 ADGRD2Q7Z7M1 963 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 SLC26A11Q86WA9 606 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 LRRC6Q86X45 466 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.62■□□□□ 0.25
TPM1-201ENST00000267996 SH3RF2Q8TEC5 729 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 ALG14Q96F25 216 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 PSKH2Q96QS6 385 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 MGME1Q9BQP7 344 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 POLR1EQ9GZS1 481 aaKnown RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 SENP1Q9P0U3 644 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 SAMD15Q9P1V8 674 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 UBA2Q9UBT2 640 aaPredicted RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 SEPT3Q9UH03 358 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 ATG2AQ2TAZ0 1938 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.61■□□□□ 0.25
TPM1-201ENST00000267996 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.61■□□□□ 0.25
TPM1-201ENST00000267996 MUSKO15146 869 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 ZMPSTE24O75844 475 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 USP1O94782 785 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 POLBP06746 335 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 GLDCP23378 1020 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 NTHL1P78549 312 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 SLC14A2Q15849 920 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 DUSP6Q16828 381 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 MPPE1Q53F39 396 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 FSCBQ5H9T9 825 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 ELMSAN1Q6PJG2 1045 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 LEKR1Q6ZMV7 388 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
TPM1-201ENST00000267996 MRRFQ96E11 262 aaKnown RBP16.61■□□□□ 0.25
TPM1-201ENST00000267996 FCRL3Q96P31 734 aaPredicted RBP16.61■□□□□ 0.25
TPM1-201ENST00000267996 GDF15Q99988 308 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 KIFC1Q9BW19 673 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 SMG9Q9H0W8 520 aaKnown RBP16.61■□□□□ 0.25
TPM1-201ENST00000267996 SOX13Q9UN79 622 aa16.61■□□□□ 0.25
TPM1-201ENST00000267996 CCDC195A0A1B0GUA6 201 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 H0Y626 953 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 ZNF197O14709 1029 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 FAM155BO75949 473 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 INHBAP08476 426 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 TCF3P15923 654 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 TPH1P17752 444 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 AVPR1AP37288 418 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 CD86P42081 329 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 GUCY1A3Q02108 690 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 ZNF235Q14590 738 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 ANKRD20A4Q4UJ75 823 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 MARK2Q7KZI7 788 aaKnown RBP16.6■□□□□ 0.25
TPM1-201ENST00000267996 GRASPQ7Z6J2 395 aaPredicted RBP16.6■□□□□ 0.25
TPM1-201ENST00000267996 BBS5Q8N3I7 341 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 CARNMT1Q8N4J0 409 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 PPM1NQ8N819 430 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 USP13Q92995 863 aaPredicted RBP16.6■□□□□ 0.25
TPM1-201ENST00000267996 CENPTQ96BT3 561 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 FEM1AQ9BSK4 669 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 MUC3BQ9H195 1237 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 NKX2-4Q9H2Z4 354 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 TLE6Q9H808 572 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 CERS4Q9HA82 394 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 HAUS2Q9NVX0 235 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 CCL26Q9Y258 94 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 RPS6KL1Q9Y6S9 549 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 FAM169AQ9Y6X4 670 aa16.6■□□□□ 0.25
TPM1-201ENST00000267996 ZCWPW2A0A1B0GU75 182 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 BRAFP15056 766 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 MZF1P28698 734 aaPredicted RBP16.59■□□□□ 0.25
TPM1-201ENST00000267996 GNGT1P63211 74 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 ARF5P84085 180 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 ITKQ08881 620 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 NAB1Q13506 487 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 KCNC3Q14003 757 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 CYTH1Q15438 398 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 RAB30Q15771 203 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 ZNF697Q5TEC3 545 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 POTEHQ6S545 545 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 RBM23Q86U06 439 aaKnown RBP16.59■□□□□ 0.25
TPM1-201ENST00000267996 CTAGE3PQ8IX95 158 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 SRRM1Q8IYB3 904 aaKnown RBP16.59■□□□□ 0.25
TPM1-201ENST00000267996 RIN3Q8TB24 985 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 MDM1Q8TC05 714 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 WFDC5Q8TCV5 224 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 PTCD2Q8WV60 388 aaKnown RBP16.59■□□□□ 0.25
TPM1-201ENST00000267996 SEMA3CQ99985 751 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 SELENOSQ9BQE4 189 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 FSD1LQ9BXM9 530 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 TRABDQ9H4I3 376 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 MRM3Q9HC36 420 aaKnown RBP16.59■□□□□ 0.25
TPM1-201ENST00000267996 TDP1Q9NUW8 608 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 ACTL7AQ9Y615 435 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 IKBKGQ9Y6K9 419 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 PDE4DIPQ5VU43 2346 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 IQANK1A0A1B0GTG1 560 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 LOC285095A0A1B0GVY8 99 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 ATP9BO43861 1147 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms