RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 RHOAP61586 193 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 ACAP2Q15057 778 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 TOMM20Q15388 145 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 OFCC1Q8IZS5 231 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
SRRM4-201ENST00000267260 ABCG2Q9UNQ0 655 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 NAALADL1Q9UQQ1 740 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 FAM240BA0A1B0GVZ2 78 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 SNAP23O00161 211 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 UPP2O95045 317 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 ARFIP1P53367 373 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 XKR8Q9H6D3 395 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 INTS7Q9NVH2 962 aaKnown RBP12.24□□□□□ -0.45
SRRM4-201ENST00000267260 UPB1Q9UBR1 384 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 VPS4AQ9UN37 437 aa12.24□□□□□ -0.45
SRRM4-201ENST00000267260 FOXN1O15353 648 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 CHST10O43529 356 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 CCR4P51679 360 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 SLC20A2Q08357 652 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 SREBF2Q12772 1141 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 SULT1C3Q6IMI6 304 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 USP45Q70EL2 814 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ACOT12Q8WYK0 555 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 UNKQ9C0B0 810 aaKnown RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 MED11Q9P086 117 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 SPEF1Q9Y4P9 236 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 B3GAT3O94766 335 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 CYP4F2P78329 520 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ELF3P78545 371 aaPredicted RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 CYP4F3Q08477 520 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 FIGNQ5HY92 759 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 IL27RAQ6UWB1 636 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 TMIEQ8NEW7 156 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ITCHQ96J02 903 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ZNF607Q96SK3 696 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 TRIM2Q9C040 744 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 CLIC5Q9NZA1 410 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 GMIPQ9P107 970 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 URADA6NGE7 173 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 CKMP06732 381 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 H2AFXP16104 143 aaPredicted RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 RRM1P23921 792 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 TMEM62Q0P6H9 643 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 BNIP2Q12982 314 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 HECTD3Q5T447 861 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 RNF44Q7L0R7 432 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 PTAR1Q7Z6K3 402 aaPredicted RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 MTMR12Q9C0I1 747 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 TMEM5Q9Y2B1 443 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ASTN2O75129 1339 aaPredicted RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 CYB561D2O14569 222 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 IFNGP01579 166 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 THP07101 528 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ZNF484Q5JVG2 852 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 GPR107Q5VW38 600 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 TEFMQ96QE5 360 aaKnown RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ULK1O75385 1050 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 OR5F1O95221 314 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 PROCP04070 461 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 FGFR1P11362 822 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 SETMARQ53H47 684 aaPredicted RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 FAM171BQ6P995 826 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 SIRT2Q8IXJ6 389 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 FBXW8Q8N3Y1 598 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ZNF75CPQ92670 426 aaPredicted RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 TMEM165Q9HC07 324 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 PCDH12Q9NPG4 1184 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 TDRKHQ9Y2W6 561 aaKnown RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 CHD2O14647 1828 aaKnown RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 H3BNX3 289 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 PCDH8O95206 1070 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 PRH1P02810 166 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 PEX6Q13608 980 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 RBM43Q6ZSC3 357 aaKnown RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 PDPRQ8NCN5 879 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 TCP10LQ8TDR4 215 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 KAT2BQ92831 832 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 REXO5Q96IC2 774 aaKnown RBP12.23□□□□□ -0.45
SRRM4-201ENST00000267260 SQORQ9Y6N5 450 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 PLK4O00444 970 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 C2CD2LO14523 706 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 LRRC69Q6ZNQ3 347 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 SLCO6A1Q86UG4 719 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 WDR49Q8IV35 697 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 VPS35Q96QK1 796 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 FAIM2Q9BWQ8 316 aa12.23□□□□□ -0.45
SRRM4-201ENST00000267260 ATXN2Q99700 1313 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 GATBO75879 557 aaKnown RBP12.22□□□□□ -0.45
SRRM4-201ENST00000267260 MYBPC1Q00872 1141 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 CYP2A13Q16696 494 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 HYIQ5T013 277 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 FAXCQ5TGI0 409 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 MCFD2Q8NI22 146 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 ZNF398Q8TD17 642 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 TNFAIP8L1Q8WVP5 186 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 ATL1Q8WXF7 558 aa12.22□□□□□ -0.45
SRRM4-201ENST00000267260 HTRA1Q92743 480 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms