RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ALDH4A1P30038 563 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 ACOT2P49753 483 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 MFAP3P55082 362 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 SOX10P56693 466 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 CNTN2Q02246 1040 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 FSTL1Q12841 308 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 MTMR1Q13613 665 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 CDONQ4KMG0 1287 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 IQSEC1Q6DN90 963 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 KLRG1Q96E93 195 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 MED30Q96HR3 178 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 EHMT1Q9H9B1 1298 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 POPDC2Q9HBU9 364 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 LTB4R2Q9NPC1 389 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 ADARB2Q9NS39 739 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 RBAKQ9NYW8 714 aaPredicted RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 ADA2Q9NZK5 511 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 TMEM216Q9P0N5 145 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 SIPA1L1O43166 1804 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 CLDN25C9JDP6 229 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 E7ENX8 843 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 VWA5AO00534 786 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 SCO2O43819 266 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 NUAK1O60285 661 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 MAN1A2O60476 641 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 KRT37O76014 449 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 MLLT3P42568 568 aaPredicted RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 NT5C2P49902 561 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 YBX1P67809 324 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 DPYSQ14117 519 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 XAF1Q6GPH4 301 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 PLEKHG7Q6ZR37 379 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 SPATC1Q76KD6 591 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 MFSD4AQ8N468 514 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 PPP1R13LQ8WUF5 828 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 OSCP1Q8WVF1 389 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 TRIB2Q92519 343 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 C1orf50Q9BV19 199 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 ADI1Q9BV57 179 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 PIH1D1Q9NWS0 290 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 HSPBP1Q9NZL4 362 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 PRPF19Q9UMS4 504 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 A8MX80 341 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 SYNCRIPO60506 623 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 ICAM1P05362 532 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 IL1R2P27930 398 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 SREBF1P36956 1147 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 NSFP46459 744 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 FKBP1CQ5VVH2 108 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 PMF1Q6P1K2 205 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 ARCQ7LC44 396 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 AKAP14Q86UN6 197 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 CCDC60Q8IWA6 550 aaPredicted RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 SLFN12Q8IYM2 578 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 RCOR2Q8IZ40 523 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 MTMR14Q8NCE2 650 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 LPGAT1Q92604 370 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 PPWD1Q96BP3 646 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 MAP6Q96JE9 813 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 R3HDMLQ9H3Y0 253 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 KCNH7Q9NS40 1196 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 PMF1-BGLAPU3KQ54 211 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 ARHGEF35A5YM69 484 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 A8MV72 311 aaPredicted RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 H7C0C1 242 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 PLIN3O60664 434 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 USP2O75604 605 aaPredicted RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 CYP2C8P10632 490 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 ITGB5P18084 799 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 MYF6P23409 242 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 ABCE1P61221 599 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 CHRNEQ04844 493 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 TFDP3Q5H9I0 405 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 TMEM236Q5W0B7 351 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 UNC5AQ6ZN44 842 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 CAND1Q86VP6 1230 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 BRSK1Q8TDC3 778 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 RSAD2Q8WXG1 361 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 ZBED3Q96IU2 234 aaPredicted RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 MCEEQ96PE7 176 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 PPP1R16BQ96T49 567 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 SERPINI1Q99574 410 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 STRA6Q9BX79 667 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 C2orf40Q9H1Z8 148 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 VRTNQ9H8Y1 702 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 ADPRHL2Q9NX46 363 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 MAP3K20Q9NYL2 800 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 IPO11Q9UI26 975 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 PRORSD1PA6NEY8 169 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 F5H423 210 aaPredicted RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 K7ENM7 598 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 TPP1O14773 563 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 ATP5BP06576 529 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 MPSTP25325 297 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 GABRB2P47870 512 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 LIG4P49917 911 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms