RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 GRM5P41594 1212 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 ACADSBP45954 432 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 SLC26A2P50443 739 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 GJA9P57773 515 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 PSME3P61289 254 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 NAB1Q13506 487 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 PRPSAP1Q14558 356 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 MARVELD2Q8N4S9 558 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 DRAXINQ8NBI3 349 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-201ENST00000263856 B3GALNT2Q8NCR0 500 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 DTNBP1Q96EV8 351 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 DCUN1D5Q9BTE7 237 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 CCDC28BQ9BUN5 200 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 DRC3Q9H069 523 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 SLC2A6Q9UGQ3 507 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 FAM95CA0A1B0GW59 222 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 YJEFN3A6XGL0 299 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 E7ENX8 843 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 CCL22O00626 93 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 AHSGP02765 367 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 CD68P34810 354 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-201ENST00000263856 NOMO2Q5JPE7 1267 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 ESRP1Q6NXG1 681 aaKnown RBP12.56□□□□□ -0.4
CHMP3-201ENST00000263856 ARHGAP36Q6ZRI8 547 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 PDZD4Q76G19 769 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF354CQ86Y25 554 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 CEP97Q8IW35 865 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 PGAM4Q8N0Y7 254 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 WNT8BQ93098 351 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 MRPS26Q9BYN8 205 aaKnown RBP12.56□□□□□ -0.4
CHMP3-201ENST00000263856 NOL11Q9H8H0 719 aaKnown RBP12.56□□□□□ -0.4
CHMP3-201ENST00000263856 EIF2B3Q9NR50 452 aaKnown RBP12.56□□□□□ -0.4
CHMP3-201ENST00000263856 IGSF9Q9P2J2 1179 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 MID2Q9UJV3 735 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 ADAM28Q9UKQ2 775 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 MAGEB3O15480 346 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 TIPRLO75663 272 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 TMCC1O94876 653 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 STMN1P16949 149 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 NOS2P35228 1153 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF470Q6ECI4 717 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 ZYG11AQ6WRX3 759 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 OSTM1Q86WC4 334 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 NCSTNQ92542 709 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 FICDQ9BVA6 458 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 RHOBTB2Q9BYZ6 727 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 TRIM8Q9BZR9 551 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 V9GYQ6 96 aa12.56□□□□□ -0.4
CHMP3-201ENST00000263856 FAM149AA5PLN7 773 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 PRDX6P30041 224 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 PLOD1Q02809 727 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 ARHGAP1Q07960 439 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 SLC12A1Q13621 1099 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 METTL21CQ5VZV1 264 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 WSCD1Q658N2 575 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 CLEC6AQ6EIG7 209 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 SLC27A1Q6PCB7 646 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 FAM43BQ6ZT52 329 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 CYS1Q717R9 158 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 FAM110BQ8TC76 370 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 SNX27Q96L92 541 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 ZBTB26Q9HCK0 441 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 PTTG2Q9NZH5 202 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 RBPJLQ9UBG7 517 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 NUDT5Q9UKK9 219 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 AP4S1Q9Y587 144 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 AURKAO14965 403 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 FOXD2O60548 495 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 SLC4A1P02730 911 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 SLC35E2BP0CK96 405 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 ADRA1BP35368 520 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 MAPK10P53779 464 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 SOX4Q06945 474 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 ITKQ08881 620 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 KIF19Q2TAC6 998 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 PAN2Q504Q3 1202 aaKnown RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 OTUD1Q5VV17 481 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 LDB1Q86U70 411 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 TMEM135Q86UB9 458 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 ZC3HC1Q86WB0 502 aaKnown RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 IFNEQ86WN2 208 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 TSPAN14Q8NG11 270 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 MIPOL1Q8TD10 442 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 LPGAT1Q92604 370 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 TNIP3Q96KP6 325 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 C11orf84Q9BUA3 381 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 TKTL2Q9H0I9 626 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 RAB26Q9ULW5 256 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 FAF1Q9UNN5 650 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 ARHGAP10A1A4S6 786 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 I6L893 689 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 TOMM70O94826 608 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 STAMBPO95630 424 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 MOCS2O96007 188 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 UGT1A6P19224 532 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 CHRNA4P43681 627 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 TAF6P49848 677 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 FASTKQ14296 549 aaKnown RBP12.55□□□□□ -0.4
CHMP3-201ENST00000263856 ARHGAP17Q68EM7 881 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms