RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 MAXP61244 160 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 LAMB3Q13751 1172 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 C11orf91Q3C1V1 193 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 RBM20Q5T481 1227 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 IL23RQ5VWK5 629 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 ZNF470Q6ECI4 717 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 UGT2A3Q6UWM9 527 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 TMEM135Q86UB9 458 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 ANKRD13AQ8IZ07 590 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 CENPLQ8N0S6 344 aaPredicted RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 TTC39CQ8N584 583 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 LRRC52Q8N7C0 313 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 SCAMP5Q8TAC9 235 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 DIS3LQ8TF46 1054 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 SREK1Q8WXA9 508 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 PCED1BQ96HM7 432 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 RPL10LQ96L21 214 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 HSFY1Q96LI6 401 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 TRPC7Q9HCX4 862 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 MPP6Q9NZW5 540 aa9.26□□□□□ -0.93
MSH4-201ENST00000263187 COPG1Q9Y678 874 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 MKI67P46013 3256 aaKnown RBP9.26□□□□□ -0.93
MSH4-201ENST00000263187 KIF3CO14782 793 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 GLDCP23378 1020 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 ETFBP38117 255 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 OLFML2BQ68BL8 750 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 CLEC6AQ6EIG7 209 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 ZC3HC1Q86WB0 502 aaKnown RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 LSMEM2Q8N112 164 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 GPC2Q8N158 579 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 EPAS1Q99814 870 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 SMOQ99835 787 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 COLEC11Q9BWP8 271 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 POMKQ9H5K3 350 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 WDR6Q9NNW5 1121 aaKnown RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 IGSF9Q9P2J2 1179 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 SFMBT1Q9UHJ3 866 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 IPPQ9Y573 584 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 PTGDR2Q9Y5Y4 395 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 HTTP42858 3142 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 DAB1O75553 588 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 RNASEH2AO75792 299 aaKnown RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 RTN3O95197 1032 aaPredicted RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 CLPTM1O96005 669 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 SLC4A1P02730 911 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 BDNFP23560 247 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 RANBP1P43487 201 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 PGFP49763 221 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 TAS2R39P59534 338 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 PDAP1Q13442 181 aaKnown RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 INSCQ1MX18 579 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 LIPMQ5VYY2 423 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 CNSTQ6PJW8 725 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 METTL25Q8N6Q8 603 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 GPRC5AQ8NFJ5 357 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 SH3RF2Q8TEC5 729 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 PPWD1Q96BP3 646 aaKnown RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 GAD1Q99259 594 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 NAT9Q9BTE0 207 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 VCX3BQ9H321 246 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 MROH8Q9H579 483 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 FBRSL1Q9HCM7 1045 aaKnown RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 ETAA1Q9NY74 926 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 FAM95CA0A1B0GW59 222 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 DARSP14868 501 aaKnown RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 YWHAQP27348 245 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 PPARGP37231 505 aaPredicted RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 CLCNKBP51801 687 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 CDH13P55290 713 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 PRAMEP78395 509 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 ZNF423Q2M1K9 1284 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 ANO4Q32M45 955 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 NADK2Q4G0N4 442 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 LRRC8EQ6NSJ5 796 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 MYO1HQ8N1T3 1032 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 TMEM151AQ8N4L1 468 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 TXNDC5Q8NBS9 432 aaKnown RBP9.25□□□□□ -0.93
MSH4-201ENST00000263187 HEXDCQ8WVB3 486 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 EME1Q96AY2 570 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 TRPV6Q9H1D0 765 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 CASS4Q9NQ75 786 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 RNF181Q9P0P0 153 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 STK39Q9UEW8 545 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 PSMD13Q9UNM6 376 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 ACOT9Q9Y305 439 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 RAP2CQ9Y3L5 183 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 SNX13Q9Y5W8 968 aa9.25□□□□□ -0.93
MSH4-201ENST00000263187 OR51F1A6NGY5 319 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 TIMM44O43615 452 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 STAU1O95793 577 aaKnown RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 MPOP05164 745 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 SLC1A2P43004 574 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 PTK2BQ14289 1009 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 SNX17Q15036 470 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 PAFAH1B3Q15102 231 aaKnown RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 AGKQ53H12 422 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 STXBP5Q5T5C0 1151 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 SDHAF4Q5VUM1 108 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 TFAP2DQ7Z6R9 452 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 CLEC14AQ86T13 490 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms