RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FBXL19Q6PCT2 694 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 ARCQ7LC44 396 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 ADAT2Q7Z6V5 191 aaKnown RBP13.65□□□□□ -0.22
SGCA-201ENST00000262018 ARFGAP1Q8N6T3 406 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 EMC1Q8N766 993 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 ZMIZ2Q8NF64 920 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 MAIP1Q8WWC4 291 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 KCTD13Q8WZ19 329 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 TTC9Q92623 222 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 FBXO32Q969P5 355 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 KCNK16Q96T55 309 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 DDX47Q9H0S4 455 aaKnown RBP13.65□□□□□ -0.22
SGCA-201ENST00000262018 PCED1AQ9H1Q7 454 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 CCSER2Q9H7U1 834 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 ARFGAP3Q9NP61 516 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 IGSF5Q9NSI5 407 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 ASNSD1Q9NWL6 643 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 DDX56Q9NY93 547 aaKnown RBP13.65□□□□□ -0.22
SGCA-201ENST00000262018 MYLKQ15746 1914 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 PIK3R2O00459 728 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 PHF2O75151 1096 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 LRCH4O75427 683 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 BEST1O76090 585 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 RTN3O95197 1032 aaPredicted RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 CISD3P0C7P0 127 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 TCF4P15884 667 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 GLDCP23378 1020 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 YWHAQP27348 245 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 SSR1P43307 286 aaKnown RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 ACADVLP49748 655 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 SLC7A5Q01650 507 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 SLC25A11Q02978 314 aaKnown RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 GPS2Q13227 327 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 HADHQ16836 314 aaKnown RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 PRAMEF14Q5SWL7 426 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 TRNP1Q6NT89 227 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 RCOR2Q8IZ40 523 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 NUP93Q8N1F7 819 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 PRELID2Q8N945 189 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 PDZD8Q8NEN9 1154 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 RXFP2Q8WXD0 754 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 BHMTQ93088 406 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 RBM41Q96IZ5 413 aaKnown RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 PIWIL1Q96J94 861 aaKnown RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 CNPY3Q9BT09 278 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 UBXN6Q9BZV1 441 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 NACA2Q9H009 215 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 GDF3Q9NR23 364 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 A0A1B0GTQ1 180 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 DFNA5O60443 496 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 HEXIM1O94992 359 aaKnown RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 ITGAVP06756 1048 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 GLI1P08151 1106 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 KRT7P08729 469 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 RARAP10276 462 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 CHRNA3P32297 505 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 PTPN7P35236 360 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 PCK1P35558 622 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 FLT3P36888 993 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 CETN2P41208 172 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 SLC5A3P53794 718 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 PCBP4P57723 403 aaKnown RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 COPS2P61201 443 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 MRPS25P82663 173 aaKnown RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 BEND6Q5SZJ8 279 aaPredicted RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 SLC26A9Q7LBE3 791 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 MAATS1Q7Z4T9 603 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 PIGZQ86VD9 579 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 KRT222Q8N1A0 295 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 EID2Q8N6I1 236 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 RUNDC3BQ96NL0 473 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 ACBD3Q9H3P7 528 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 ZNF446Q9NWS9 450 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 COMMD8Q9NX08 183 aa13.64□□□□□ -0.23
SGCA-201ENST00000262018 HEMK1Q9Y5R4 338 aaPredicted RBP13.64□□□□□ -0.23
SGCA-201ENST00000262018 TCRBV7S2A1N4TA0A589 114 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 HHLA1C9JL84 531 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 RNF8O76064 485 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 FSBPO95073 299 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 KRT1P04264 644 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 PDGFRAP16234 1089 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 ACSL1P33121 698 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 GJC1P36383 396 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 C21orf59P57076 290 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 KLF1Q13351 362 aaPredicted RBP13.63□□□□□ -0.23
SGCA-201ENST00000262018 DHX34Q14147 1143 aaKnown RBP13.63□□□□□ -0.23
SGCA-201ENST00000262018 CCDC14Q49A88 953 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 ATP13A4Q4VNC1 1196 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 TXNRD3NBQ6F5E7 133 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 IFT20Q8IY31 132 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 OSBPL8Q9BZF1 889 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 FBXO44Q9H4M3 255 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 LRRC19Q9H756 370 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 PLK2Q9NYY3 685 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 IL37Q9NZH6 218 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 MARK1Q9P0L2 795 aa13.63□□□□□ -0.23
SGCA-201ENST00000262018 THAP10Q9P2Z0 257 aaPredicted RBP13.63□□□□□ -0.23
SGCA-201ENST00000262018 CLCA2Q9UQC9 943 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms