RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PIK3C3Q8NEB9 887 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 BTBD10Q9BSF8 475 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FICDQ9BVA6 458 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ANLNQ9NQW6 1124 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 MKS1Q9NXB0 559 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SNX7Q9UNH6 387 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KIAA0100Q14667 2235 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CCDC195A0A1B0GUA6 201 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 FAM237BA0A1B0GVD1 139 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 KCNH1O95259 989 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MMP3P08254 477 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CASP1P29466 404 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 INO80DQ53TQ3 878 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PLEKHA7Q6IQ23 1121 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ZNF549Q6P9A3 640 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 STYXQ8WUJ0 223 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 AP3S1Q92572 193 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 RNF157Q96PX1 679 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 DPY30Q9C005 99 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 STK25O00506 426 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TSPAN1O60635 241 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CTSHP09668 335 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 GSTM5P46439 218 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 GLUD2P49448 558 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 GK3PQ14409 553 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 RNF135Q8IUD6 432 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 DPP10Q8N608 796 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TNFRSF25Q93038 417 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PCDH10Q9P2E7 1040 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CHORDC1Q9UHD1 332 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 COLEC10Q9Y6Z7 277 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CENPXA8MT69 81 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SERPINB7O75635 380 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 KRT34O76011 436 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 YBX3P16989 372 aaKnown RBP eCLIP4.36□□□□□ -1.716e-6■■■□□ 15.3
VPS13C-202ENST00000261517 GLRA2P23416 452 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 L1CAMP32004 1257 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MRPS5P82675 430 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 KLHL26Q53HC5 615 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CARNMT1Q8N4J0 409 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 HAS1Q92839 578 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ZNF607Q96SK3 696 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NT5MQ9NPB1 228 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NMRK2Q9NPI5 230 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ASTN1O14525 1302 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SEPT4O43236 478 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 LIASO43766 372 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 LDLRP01130 860 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MIPP30301 263 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NUP62P37198 522 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 FUT2Q10981 343 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ATP13A5Q4VNC0 1218 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 UBE2R2Q712K3 238 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CLYBLQ8N0X4 340 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ART4Q93070 314 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 OTUB2Q96DC9 234 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NSMCE2Q96MF7 247 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 QKIQ96PU8 341 aaKnown RBP eCLIP4.36□□□□□ -1.711e-6■■■■■ 50.7
VPS13C-202ENST00000261517 PPP1R16BQ96T49 567 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MLPHQ9BV36 600 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SUPT7LO94864 414 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SERPINA6P08185 405 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PAICSP22234 425 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ME2P23368 584 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 DPP6P42658 865 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CLK2P49760 499 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MAPK10P53779 464 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PKNOX1P55347 436 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TNK2Q07912 1038 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ZSWIM7Q19AV6 140 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ARMCX4Q5H9R4 360 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 GPR158Q5T848 1215 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 LIPMQ5VYY2 423 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NECAB2Q7Z6G3 386 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CLP1Q92989 425 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 FAM120BQ96EK7 910 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SPACA7Q96KW9 195 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 INTS10Q9NVR2 710 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 COQ4Q9Y3A0 265 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 RAP2CQ9Y3L5 183 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MYO10Q9HD67 2058 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SMIM31A0A1B0GVY4 71 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 BNIP3LO60238 219 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 WDR47O94967 919 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 C8GP07360 202 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CBSLP0DN79 551 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CCNB1P14635 433 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CBSP35520 551 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PDK4Q16654 411 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NDUFA9Q16795 377 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM259Q4ZIN3 620 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 LDLRAP1Q5SW96 308 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 C9orf57Q5W0N0 161 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PGBD3Q8N328 593 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CXorf40AQ8TE69 158 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 GPR20Q99678 358 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 HNRNPABQ99729 332 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 THTPAQ9BU02 230 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TLR10Q9BXR5 811 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms