RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 DNAJB3Q8WWF6 145 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 TMEM79Q9BSE2 394 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 FICDQ9BVA6 458 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
PGBD1-201ENST00000259883 USP3Q9Y6I4 520 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 PDLIM1O00151 329 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 AKAP10O43572 662 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 KCNA5P22460 613 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 GABRB3P28472 473 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 RPL5P46777 297 aaKnown RBP13.42□□□□□ -0.26
PGBD1-201ENST00000259883 SNX16P57768 344 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 ARHGAP1Q07960 439 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 ZNF423Q2M1K9 1284 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 ZNF789Q5FWF6 425 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 OGFRL1Q5TC84 451 aaPredicted RBP13.42□□□□□ -0.26
PGBD1-201ENST00000259883 OTUD1Q5VV17 481 aaPredicted RBP13.42□□□□□ -0.26
PGBD1-201ENST00000259883 FAM81AQ8TBF8 368 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 TKTL2Q9H0I9 626 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 DSEQ9UL01 958 aa13.42□□□□□ -0.26
PGBD1-201ENST00000259883 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 PLOD2O00469 737 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 FAM58BPP0C7Q3 252 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 CES1P23141 567 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
PGBD1-201ENST00000259883 PLOD1Q02809 727 aaPredicted RBP13.41□□□□□ -0.26
PGBD1-201ENST00000259883 RBM20Q5T481 1227 aaKnown RBP13.41□□□□□ -0.26
PGBD1-201ENST00000259883 LIPMQ5VYY2 423 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 EFCAB1Q9HAE3 211 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 DNAJB4Q9UDY4 337 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 STAP1Q9ULZ2 295 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 RAP2CQ9Y3L5 183 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 SUPT3HO75486 399 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 CNMDO75829 334 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 AP2A1O95782 977 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 FAM200BP0CF97 657 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 PSMC3P17980 439 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 ADRA1BP35368 520 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 TAS2R39P59534 338 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 MAXP61244 160 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 PLIN5Q00G26 463 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 APBB2Q92870 758 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 DGCR14Q96DF8 476 aaKnown RBP13.41□□□□□ -0.26
PGBD1-201ENST00000259883 SLC29A1Q99808 456 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 RLFQ13129 1914 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 ANK1P16157 1881 aa13.41□□□□□ -0.26
PGBD1-201ENST00000259883 FAM95CA0A1B0GW59 222 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 TMX2-CTNND1H3BSU7 103 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 PGK1P00558 417 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 SBK3P0C264 359 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 SLC35E2BP0CK96 405 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 MLNP12872 115 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 GLDCP23378 1020 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 PSME3P61289 254 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 KIF19Q2TAC6 998 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 ANO4Q32M45 955 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 TWF2Q6IBS0 349 aaKnown RBP13.4□□□□□ -0.26
PGBD1-201ENST00000259883 CNSTQ6PJW8 725 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 TXNDC5Q8NBS9 432 aaKnown RBP13.4□□□□□ -0.26
PGBD1-201ENST00000259883 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 WNT8BQ93098 351 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 PRICKLE1Q96MT3 831 aaPredicted RBP13.4□□□□□ -0.26
PGBD1-201ENST00000259883 CAMKK2Q96RR4 588 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 BRD8Q9H0E9 1235 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 SOX17Q9H6I2 414 aaPredicted RBP13.4□□□□□ -0.26
PGBD1-201ENST00000259883 TMEM30AQ9NV96 361 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 ACOT9Q9Y305 439 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 C7orf72A4D263 438 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
PGBD1-201ENST00000259883 DDHD2O94830 711 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 ASLP04424 464 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 RPS12P25398 132 aaKnown RBP13.4□□□□□ -0.26
PGBD1-201ENST00000259883 MAP7D1Q3KQU3 841 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 PIGGQ5H8A4 983 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 MFSD6LQ8IWD5 586 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 CENPLQ8N0S6 344 aaPredicted RBP13.4□□□□□ -0.26
PGBD1-201ENST00000259883 OR6P1Q8NGX9 317 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 LPGAT1Q92604 370 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 LCTP09848 1927 aa13.4□□□□□ -0.26
PGBD1-201ENST00000259883 MYBPHLA2RUH7 354 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 MSI1O43347 362 aaKnown RBP13.39□□□□□ -0.27
PGBD1-201ENST00000259883 CHRM3P20309 590 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 CAPRIN1Q14444 709 aaKnown RBP13.39□□□□□ -0.27
PGBD1-201ENST00000259883 C4orf22Q6V702 233 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 B3GNT6Q6ZMB0 384 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 TRIM67Q6ZTA4 783 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 CHST15Q7LFX5 561 aaPredicted RBP13.39□□□□□ -0.27
PGBD1-201ENST00000259883 ZC3HC1Q86WB0 502 aaKnown RBP13.39□□□□□ -0.27
PGBD1-201ENST00000259883 EXOC8Q8IYI6 725 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 LSMEM2Q8N112 164 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 HEXDCQ8WVB3 486 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 LPPQ93052 612 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 SNX27Q96L92 541 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 WDCPQ9H6R7 721 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 VRTNQ9H8Y1 702 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 EPS15L1Q9UBC2 864 aa13.39□□□□□ -0.27
PGBD1-201ENST00000259883 CPA4Q9UI42 421 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms