RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 MMP13P45452 471 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 GDI2P50395 445 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 RAB28P51157 221 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 STXBP1P61764 594 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 ARHGAP8P85298 464 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 DMPKQ09013 629 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 MTX1Q13505 466 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CRY1Q16526 586 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 POM121L1PQ3SYA9 428 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 ABHD17BQ5VST6 288 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 ACSM2BQ68CK6 577 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 TMPPEQ6ZT21 453 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 NEK10Q6ZWH5 1172 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 NUP54Q7Z3B4 507 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CBWD2Q8IUF1 395 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 PSTKQ8IV42 348 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 DENND1CQ8IV53 801 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 NAT16Q8N8M0 369 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CLEC1AQ8NC01 280 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 ST13P5Q8NFI4 369 aaPredicted RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 OR4K17Q8NGC6 315 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 MAPK15Q8TD08 544 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CASKIN2Q8WXE0 1202 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 MTMR8Q96EF0 704 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 GFM1Q96RP9 751 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 FEM1AQ9BSK4 669 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 FAM126AQ9BYI3 521 aaPredicted RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 JMJD4Q9H9V9 463 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 POPDC2Q9HBU9 364 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 WDR6Q9NNW5 1121 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 IMPAD1Q9NX62 359 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 PADI3Q9ULW8 664 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 TIMM13Q9Y5L4 95 aaPredicted RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 SNX8Q9Y5X2 465 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CTTNBP2Q8WZ74 1663 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 TRPC5OSA6NMA1 111 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 FCHO1O14526 889 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 GLSO94925 669 aaPredicted RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 SNX4O95219 450 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 APRTP07741 180 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 TMEM253P0C7T8 217 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 ADH5P11766 374 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CPA1P15085 419 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 NPR3P17342 541 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 TOB1P50616 345 aaPredicted RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 PMS1P54277 932 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 CASP9P55211 416 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 PSMC6P62333 389 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 MUM1Q2TAK8 710 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 INTS11Q5TA45 600 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 DEPDC1Q5TB30 811 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 PIK3R6Q5UE93 754 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 BICRALQ6AI39 1079 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 GDF6Q6KF10 455 aaPredicted RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 OGFOD2Q6N063 350 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 FAM171BQ6P995 826 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 SYT10Q6XYQ8 523 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 SLC29A4Q7RTT9 530 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 SNX20Q7Z614 316 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 LRRN4CLQ8ND94 238 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 OR52L1Q8NGH7 329 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 FAM81AQ8TBF8 368 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 NSMCE3Q96MG7 304 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CDADC1Q9BWV3 514 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 MRPL1Q9BYD6 325 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 ZYG11BQ9C0D3 744 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 TASP1Q9H6P5 420 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 NRDE2Q9H7Z3 1164 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 AGO4Q9HCK5 861 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 SEMA3GQ9NS98 782 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 INTS13Q9NVM9 706 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 COMMD8Q9NX08 183 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 APEX2Q9UBZ4 518 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 TBK1Q9UHD2 729 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 ZNF180Q9UJW8 692 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 RCOR1Q9UKL0 485 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 RARRES3Q9UL19 164 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 RUVBL1Q9Y265 456 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 EDDM13A0A1B0GTR0 161 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CCDC195A0A1B0GUA6 201 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CFAP73A6NFT4 308 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 GSG1L2A8MUP6 293 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PRODHO43272 600 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 STX11O75558 287 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ATG7O95352 703 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CYP21A2P08686 494 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PTPN1P18031 435 aaKnown RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 DRD1P21728 446 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 SREBF1P36956 1147 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 TNFRSF4P43489 277 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 HSPA13P48723 471 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CAPZA1P52907 286 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CDH15P55291 814 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 IRF8Q02556 426 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 KCNMA1Q12791 1236 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 TROAPQ12815 778 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 MYBPC2Q14324 1141 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 LSM12Q3MHD2 195 aaKnown RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 ARHGAP40Q5TG30 622 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 INTS5Q6P9B9 1019 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms