RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 PIGVQ9NUD9 493 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 MORF4L1Q9UBU8 362 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 AURKAO14965 403 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 DDHD2O94830 711 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 LIMK2P53671 638 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 TPD52P55327 224 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ESRRGP62508 458 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 VGLL4Q14135 290 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 DPYSL2Q16555 572 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 PSTKQ8IV42 348 aaKnown RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 PAF1Q8N7H5 531 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 SLC35F5Q8WV83 523 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 MPHOSPH6Q99547 160 aaKnown RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 SLC29A1Q99808 456 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 CRYL1Q9Y2S2 319 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 PTGDR2Q9Y5Y4 395 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 NCF1BA6NI72 391 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 NCF1CA8MVU1 366 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 C19orf81C9J6K1 198 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 MDM4O15151 490 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ENDOD1O94919 500 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 SMIM18P0DKX4 95 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 NCF1P14598 390 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 NR2C2P49116 596 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 MAXP61244 160 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 NIPAL4Q0D2K0 466 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 SNAPC2Q13487 334 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ANKRD23Q86SG2 305 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 CHST13Q8NET6 341 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 DNERQ8NFT8 737 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ACMSDQ8TDX5 336 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 PRICKLE1Q96MT3 831 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 SIKE1Q9BRV8 207 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 C6orf203Q9P0P8 240 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 STAP1Q9ULZ2 295 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 RAP2CQ9Y3L5 183 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 NME7Q9Y5B8 376 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 TRIP11Q15643 1979 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ZBTB42B2RXF5 422 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 G3V2L1 256 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 BOLA2-SMG1P6H3BVE0 249 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 PLOD2O00469 737 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ATP6V1G1O75348 118 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 CYP2C8P10632 490 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 STMN1P16949 149 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 CHRM3P20309 590 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 PTPN3P26045 913 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 TKTP29401 623 aaKnown RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 BCAT1P54687 386 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 TTLL4Q14679 1199 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 FBXO47Q5MNV8 452 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 LDLRAP1Q5SW96 308 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 RMND5BQ96G75 393 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 UPF3AQ9H1J1 476 aaKnown RBP12.13□□□□□ -0.47
USHBP1-201ENST00000252597 ASB7Q9H672 318 aa12.13□□□□□ -0.47
USHBP1-201ENST00000252597 FAM95CA0A1B0GW59 222 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 MRASO14807 208 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 UBDO15205 165 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 SPTLC1O15269 473 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 DLX3O60479 287 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 DDNO94850 711 aaPredicted RBP12.12□□□□□ -0.47
USHBP1-201ENST00000252597 FBXO21O94952 628 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 PRKCGP05129 697 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 PIRTP0C851 137 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 YBX3P16989 372 aaKnown RBP eCLIP12.12□□□□□ -0.47
USHBP1-201ENST00000252597 SLC5A2P31639 672 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 ENTPD1P49961 510 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 STX1BP61266 288 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 IL1RL1Q01638 556 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 PRKAA1Q13131 559 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 GPR107Q5VW38 600 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 SPPL2CQ8IUH8 684 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 ZFP42Q96MM3 310 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 TXNRD2Q9NNW7 524 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
USHBP1-201ENST00000252597 FER1L6Q2WGJ9 1857 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 EVPLQ92817 2033 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 GOLGA8CPA6NN73 597 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 TIMM44O43615 452 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 STRNO43815 780 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 TPP2P29144 1249 aaPredicted RBP12.12□□□□□ -0.47
USHBP1-201ENST00000252597 ATICP31939 592 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 DCTN2Q13561 401 aaKnown RBP12.12□□□□□ -0.47
USHBP1-201ENST00000252597 MYBPC3Q14896 1274 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 SPANXN3Q5MJ09 141 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 TBCELQ5QJ74 424 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 LIPMQ5VYY2 423 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 TWF2Q6IBS0 349 aaKnown RBP12.12□□□□□ -0.47
USHBP1-201ENST00000252597 XKR5Q6UX68 686 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 OR52K2Q8NGK3 314 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 RRN3Q9NYV6 651 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 DNAJB4Q9UDY4 337 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 CPA4Q9UI42 421 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms