RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 LRRC43Q8N309 656 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 TOP6BLQ8N6T0 577 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 RNF169Q8NCN4 708 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 TSPAN14Q8NG11 270 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 RP9Q8TA86 221 aaKnown RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 DLG3Q92796 817 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 LIN28AQ9H9Z2 209 aaKnown RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 BCAP29Q9UHQ4 241 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 ZNF236Q9UL36 1845 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 RNASEH2AO75792 299 aaKnown RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 BCAS2O75934 225 aaPredicted RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 AMHP03971 560 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 MLNP12872 115 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 MGAT1P26572 445 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 EPHA3P29320 983 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 BEX3Q00994 111 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 NME3Q13232 169 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 NAB1Q13506 487 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 CYTH1Q15438 398 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 LRRC8BQ6P9F7 803 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 PGAM4Q8N0Y7 254 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 PDCD6IPQ8WUM4 868 aaKnown RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 GFM2Q969S9 779 aaKnown RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 ZNF512Q96ME7 567 aaPredicted RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 ZFP42Q96MM3 310 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 PIGVQ9NUD9 493 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 C7orf72A4D263 438 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 STX16-NPEPL1H3BU86 382 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 ZNF865P0CJ78 1059 aaPredicted RBP19.21■□□□□ 0.67
SNX4-201ENST00000251775 PSMB4P28070 264 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 CDK9P50750 372 aaKnown RBP19.21■□□□□ 0.67
SNX4-201ENST00000251775 PPP1R36Q96LQ0 422 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 TSPAN18Q96SJ8 248 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 CCT7Q99832 543 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 DNAI2Q9GZS0 605 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 PRDM12Q9H4Q4 367 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 LRRC4Q9HBW1 653 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 SEPT10Q9P0V9 454 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 CNOT11Q9UKZ1 510 aaKnown RBP19.21■□□□□ 0.67
SNX4-201ENST00000251775 PCDHGA4Q9Y5G9 962 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 TMEM114B3SHH9 223 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 NEMP1O14524 444 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 NRP1O14786 923 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 MYL3P08590 195 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 ERVK-10P10266 1014 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 ENO3P13929 434 aaPredicted RBP19.21■□□□□ 0.67
SNX4-201ENST00000251775 PGAM1P18669 254 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 ME2P23368 584 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 MAGEA12P43365 314 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 ALDH3B2P48448 385 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 GLUD2P49448 558 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 CRYBB1P53674 252 aaPredicted RBP19.21■□□□□ 0.67
SNX4-201ENST00000251775 LSM12Q3MHD2 195 aaKnown RBP19.21■□□□□ 0.67
SNX4-201ENST00000251775 HACE1Q8IYU2 909 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 CCNYQ8ND76 341 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 ADAM32Q8TC27 787 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 KCTD13Q8WZ19 329 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 CPA4Q9UI42 421 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 BLOC1S6Q9UL45 172 aa19.21■□□□□ 0.67
SNX4-201ENST00000251775 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.2■□□□□ 0.66
SNX4-201ENST00000251775 ACOT8O14734 319 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 FYNP06241 537 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 LRPAP1P30533 357 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 MAP3K7CLP57077 242 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 MGAT5BQ3V5L5 792 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 BSPRYQ5W0U4 402 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 POTEHQ6S545 545 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 ZNF567Q8N184 647 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 BBS5Q8N3I7 341 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 DCLK2Q8N568 766 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 SLC2A13Q96QE2 648 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 HAUS8Q9BT25 410 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 ANLNQ9NQW6 1124 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 EIF2B3Q9NR50 452 aaKnown RBP19.2■□□□□ 0.66
SNX4-201ENST00000251775 MEIS3P2A8K0S8 358 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 FAM72CH0Y354 149 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 GABRDO14764 452 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 MPSTP25325 297 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 GP5P40197 560 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 TKTL1P51854 596 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 DPYSQ14117 519 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 NRF1Q16656 503 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 FAM72AQ5TYM5 149 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 TWF2Q6IBS0 349 aaKnown RBP19.2■□□□□ 0.66
SNX4-201ENST00000251775 FAM72DQ6L9T8 149 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 FAM72BQ86X60 149 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 TRIML2Q8N7C3 387 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 GRIN3AQ8TCU5 1115 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 WNT8BQ93098 351 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 MOCOSQ96EN8 888 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 MED10Q9BTT4 135 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 WDR41Q9HAD4 459 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 PRDM16Q9HAZ2 1276 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 TXNDC16Q9P2K2 825 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 EPS15L1Q9UBC2 864 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 STAP1Q9ULZ2 295 aa19.2■□□□□ 0.66
SNX4-201ENST00000251775 MATN2O00339 956 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 CHRNGP07510 517 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 TXNL4AP83876 142 aaKnown RBP19.19■□□□□ 0.66
SNX4-201ENST00000251775 PLOD1Q02809 727 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms