RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 LNP1A1A4G5 178 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 KPNA3O00505 521 aaPredicted RBP24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 TMCC1O94876 653 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 FSBPO95073 299 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 CFIP05156 583 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 FECHP22830 423 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 MAOBP27338 520 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 SERPINB6P35237 376 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 CCNHP51946 323 aaPredicted RBP24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 CDH6P55285 790 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 RAD51Q06609 339 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 MESDQ14696 234 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 PDK2Q15119 407 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 ARSIQ5FYB1 569 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 NCEH1Q6PIU2 408 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 TMCO3Q6UWJ1 677 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 MAP7D3Q8IWC1 876 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 BIRC7Q96CA5 298 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 CELF6Q96J87 481 aaKnown RBP24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 CSPG4P5Q96PW8 444 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 CAPN10Q9HC96 672 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 DLL3Q9NYJ7 618 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 IMPACTQ9P2X3 320 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 EIF2B4Q9UI10 523 aaKnown RBP24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 ACTL7AQ9Y615 435 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 WASF2Q9Y6W5 498 aa24.77■■□□□ 1.56
SDF2L1-201ENST00000248958 FAM47DPA6NHR8 397 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 SLC30A4O14863 429 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 PLRG1O43660 514 aaKnown RBP24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 GDF9O60383 454 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 PRAMEF11O60813 436 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 SYPP08247 313 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 CD27P26842 260 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 PAPOLAP51003 745 aaKnown RBP24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 CCR5P51681 352 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 CNTN1Q12860 1018 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 ARHGAP12Q8IWW6 846 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 SNX19Q92543 992 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 TSC1Q92574 1164 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 RMDN1Q96DB5 314 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 TM6SF2Q9BZW4 377 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 MIR1-1HGQ9H1L0 117 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 PDFQ9HBH1 243 aa24.76■■□□□ 1.55
SDF2L1-201ENST00000248958 BCAT2O15382 392 aaPredicted RBP24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 LEFTY1O75610 366 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 IPO7O95373 1038 aaKnown RBP24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 POP4O95707 220 aaKnown RBP24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 IGSF6O95976 241 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 AMPD1P23109 780 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 SLC1A1P43005 524 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 RHOAP61586 193 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 RFTN1Q14699 578 aaPredicted RBP24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 AGBL4Q5VU57 503 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 RYBPQ8N488 228 aaPredicted RBP24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 KCTD6Q8NC69 237 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 GRIN3AQ8TCU5 1115 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 GDAP1L1Q96MZ0 367 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 OSBPL1AQ9BXW6 950 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 HDAC8Q9BY41 377 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 ZDHHC5Q9C0B5 715 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 TMEM9BQ9NQ34 198 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 GON4LQ3T8J9 2241 aa24.75■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3DA0A087WVF3 549 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3IA0A087WXS9 549 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3EA0A087X179 549 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3KA0A087X1G2 549 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3FA6NER0 549 aaPredicted RBP24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 C10orf142B7Z368 130 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3LB9A6J9 549 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 DFFAO00273 331 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 IGHV4-34P06331 123 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3HP0C7X1 549 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 ENGP17813 658 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 NUDT1P36639 197 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 ARSEP51690 589 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 METAP1P53582 386 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 HADHBP55084 474 aaKnown RBP24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 IL10RBQ08334 325 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 MYLK3Q32MK0 819 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 STPG1Q5TH74 334 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3GQ6DHY5 549 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3CQ6IPX1 549 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 NEK5Q6P3R8 708 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 LEKR1Q6ZMV7 388 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 ERN2Q76MJ5 926 aaKnown RBP24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 TBC1D3Q8IZP1 549 aaPredicted RBP24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 ZCCHC9Q8N567 271 aaKnown RBP24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 NPWQ8N729 165 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 ARRDC3Q96B67 414 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 ZNF670Q9BS34 389 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 ZDHHC6Q9H6R6 413 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 SP110Q9HB58 689 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 PREBQ9HCU5 417 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 RXFP3Q9NSD7 469 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 PCDHA13Q9Y5I0 950 aa24.74■■□□□ 1.55
SDF2L1-201ENST00000248958 A0A1W2PPC4 97 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 TMEM110-MUSTN1A8MSY1 372 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 ARHGAP33O14559 1287 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 ITGB7P26010 798 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 ATXN3P54252 364 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms