RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CSE1LP55060 971 aaKnown RBP25.91■■□□□ 1.74
RAB40C-201ENST00000248139 SEPT6Q14141 434 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 LIPMQ5VYY2 423 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 SEL1L3Q68CR1 1132 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 PM20D1Q6GTS8 502 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 ARHGAP12Q8IWW6 846 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 SLC39A8Q9C0K1 460 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 RHOJQ9H4E5 214 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 MAGEB16A2A368 324 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 ERI2A8K979 691 aaKnown RBP25.91■■□□□ 1.74
RAB40C-201ENST00000248139 MYCNP04198 464 aaPredicted RBP25.91■■□□□ 1.74
RAB40C-201ENST00000248139 AIF1P55008 147 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 ZYG11AQ6WRX3 759 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 PDSS2Q86YH6 399 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 RCN3Q96D15 328 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 TBL1YQ9BQ87 522 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 KIFC1Q9BW19 673 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 DRC3Q9H069 523 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 INPP5FQ9Y2H2 1132 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 TMEM114B3SHH9 223 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 H3BNX3 289 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 HDAC3O15379 428 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 MTTPP55157 894 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 MAP2K5Q13163 448 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 DENND5AQ6IQ26 1287 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 AAGABQ6PD74 315 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 CDRT15Q96T59 188 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 NDNQ99608 321 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 CDH9Q9ULB4 789 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 NEU3Q9UQ49 428 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 RAP2CQ9Y3L5 183 aa25.91■■□□□ 1.74
RAB40C-201ENST00000248139 TTC24A2A3L6 582 aaPredicted RBP25.9■■□□□ 1.74
RAB40C-201ENST00000248139 TXNDC9O14530 226 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 F9P00740 461 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 ITGB1P05556 798 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 HNRNPLP14866 589 aaKnown RBP eCLIP25.9■■□□□ 1.74
RAB40C-201ENST00000248139 CPT1AP50416 773 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 FSCN1Q16658 493 aaKnown RBP25.9■■□□□ 1.74
RAB40C-201ENST00000248139 ZNF789Q5FWF6 425 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 PKN3Q6P5Z2 889 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 DCLRE1AQ6PJP8 1040 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 ATPAF2Q8N5M1 289 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 SNX31Q8N9S9 440 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 AGO3Q9H9G7 860 aaKnown RBP25.9■■□□□ 1.74
RAB40C-201ENST00000248139 MTSS1O43312 755 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 ENO3P13929 434 aaPredicted RBP25.9■■□□□ 1.74
RAB40C-201ENST00000248139 GRAMD1BQ3KR37 738 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 TSTD2Q5T7W7 516 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 CXCL17Q6UXB2 119 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 OR10T2Q8NGX3 314 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 SREK1Q8WXA9 508 aaKnown RBP25.9■■□□□ 1.74
RAB40C-201ENST00000248139 CYP4F12Q9HCS2 524 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 DNAJB4Q9UDY4 337 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 SLC45A1Q9Y2W3 748 aa25.9■■□□□ 1.74
RAB40C-201ENST00000248139 FAM95CA0A1B0GW59 222 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 TCN1P20061 433 aaPredicted RBP25.89■■□□□ 1.74
RAB40C-201ENST00000248139 SLC1A2P43004 574 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 PURAQ00577 322 aaKnown RBP25.89■■□□□ 1.74
RAB40C-201ENST00000248139 LRRC8EQ6NSJ5 796 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 DSELQ8IZU8 1212 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 FAM156AQ8NDB6 213 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 TSNARE1Q96NA8 513 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 RTKNQ9BST9 563 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 CHST12Q9NRB3 414 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 RAD54BQ9Y620 910 aa25.89■■□□□ 1.74
RAB40C-201ENST00000248139 CCL22O00626 93 aa25.89■■□□□ 1.73
RAB40C-201ENST00000248139 PAGE1O75459 146 aa25.89■■□□□ 1.73
RAB40C-201ENST00000248139 THOP1P52888 689 aa25.89■■□□□ 1.73
RAB40C-201ENST00000248139 POLE2P56282 527 aa25.89■■□□□ 1.73
RAB40C-201ENST00000248139 TAS2R39P59534 338 aa25.89■■□□□ 1.73
RAB40C-201ENST00000248139 ELMO2Q96JJ3 720 aa25.89■■□□□ 1.73
RAB40C-201ENST00000248139 TRPV6Q9H1D0 765 aa25.89■■□□□ 1.73
RAB40C-201ENST00000248139 ACOT9Q9Y305 439 aa25.89■■□□□ 1.73
RAB40C-201ENST00000248139 MTF2Q9Y483 593 aaPredicted RBP25.89■■□□□ 1.73
RAB40C-201ENST00000248139 HLA-DQB2P05538 268 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 OR4Q2P0C623 313 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 XRCC1P18887 633 aaPredicted RBP25.88■■□□□ 1.73
RAB40C-201ENST00000248139 DPP6P42658 865 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 MRPS6P82932 125 aaKnown RBP25.88■■□□□ 1.73
RAB40C-201ENST00000248139 CACNB2Q08289 660 aaPredicted RBP25.88■■□□□ 1.73
RAB40C-201ENST00000248139 UPP1Q16831 310 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 MORN1Q5T089 497 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 ZNF470Q6ECI4 717 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 TMEM86AQ8N2M4 240 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 SLC38A7Q9NVC3 462 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 MAFKO60675 156 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 DDHD2O94830 711 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 CHRNA1P02708 482 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 PLK1P53350 603 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 SLC12A1Q13621 1099 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 INTS6LQ5JSJ4 861 aaKnown RBP25.88■■□□□ 1.73
RAB40C-201ENST00000248139 PCID2Q5JVF3 399 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 RBM20Q5T481 1227 aaKnown RBP25.88■■□□□ 1.73
RAB40C-201ENST00000248139 SDHAF4Q5VUM1 108 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 C14orf80Q86SX3 495 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 STYXQ8WUJ0 223 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 CASP10Q92851 521 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 GCNAQ96QF7 691 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 VAT1Q99536 393 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 KLHL4Q9C0H6 718 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms