RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CORO1AP31146 461 aaKnown RBP23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 CDH17Q12864 832 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 SPRED3Q2MJR0 410 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 DENND5AQ6IQ26 1287 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 ADAMTS19Q8TE59 1207 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 CDKL2Q92772 493 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 RPRD1AQ96P16 312 aaPredicted RBP23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 FAM111AQ96PZ2 611 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 SRPK1Q96SB4 655 aaKnown RBP23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 CORO1BQ9BR76 489 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 IL22Q9GZX6 179 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 MYLKQ15746 1914 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 HELZP42694 1942 aaKnown RBP23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 FAM237BA0A1B0GVD1 139 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 A0A1W2PRU2 124 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 PSMD3O43242 534 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 CLASP2O75122 1294 aaKnown RBP23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 ALADP13716 330 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 TACR2P21452 398 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 ADRA1AP35348 466 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 SGSHP51688 502 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 GPM6BQ13491 265 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 TIFABQ6ZNK6 161 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 CFAP52Q8N1V2 620 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 ZNF75CPQ92670 426 aaPredicted RBP23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 PITPNM3Q9BZ71 974 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 USP15Q9Y4E8 981 aaPredicted RBP23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 SZT2Q5T011 3432 aa23.72■■□□□ 1.39
SYNGR3-201ENST00000248121 TNRC18O15417 2968 aaPredicted RBP23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 WDR91A4D1P6 747 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 EPOPA6NHQ4 379 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 MYO1CO00159 1063 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 ANXA9O76027 345 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 RB1P06400 928 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 MBL2P11226 248 aaPredicted RBP23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 KPNA1P52294 538 aaPredicted RBP23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 ERVK-21P61565 698 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 NAB1Q13506 487 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 ZNF697Q5TEC3 545 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 ZNF449Q6P9G9 518 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 SPATA21Q7Z572 469 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 LINC00523Q86TU6 105 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 RASSF3Q86WH2 238 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 IPMKQ8NFU5 416 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 CCT6BQ92526 530 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 FATE1Q969F0 183 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 PRICKLE1Q96MT3 831 aaPredicted RBP23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 ZNF778Q96MU6 729 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 TBL1YQ9BQ87 522 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 NKX2-4Q9H2Z4 354 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 MKS1Q9NXB0 559 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 PRKAG3Q9UGI9 489 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 SOX13Q9UN79 622 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 CHD5Q8TDI0 1954 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 COPEO14579 308 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 ACSL4O60488 711 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 MYL4P12829 197 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 HNRNPDQ14103 355 aaKnown RBP23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 FRG1Q14331 258 aaKnown RBP23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 PPM1LQ5SGD2 360 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 ANKS4BQ8N8V4 417 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 MAB21L3Q8N8X9 362 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 LRRC8CQ8TDW0 803 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 PTPRN2Q92932 1015 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 TCEAL4Q96EI5 215 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 VPS11Q9H270 941 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 ASB3Q9Y575 518 aa23.71■■□□□ 1.39
SYNGR3-201ENST00000248121 C5orf42Q9H799 3197 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 H3BNC9 293 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 KIAA0754O94854 1291 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 ALDOAP04075 364 aaKnown RBP23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 CNTFP26441 200 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 SLC10A7Q0GE19 358 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 SEPT7Q16181 437 aaKnown RBP23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 ANO4Q32M45 955 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 RNF187Q5TA31 235 aaPredicted RBP23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 LGI2Q8N0V4 545 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 TTC16Q8NEE8 873 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 GDPD5Q8WTR4 605 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 MRGPRX2Q96LB1 330 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 FICDQ9BVA6 458 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 ZFATQ9P243 1243 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 PHTF1Q9UMS5 762 aa23.7■■□□□ 1.38
SYNGR3-201ENST00000248121 EDF1O60869 148 aaKnown RBP23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 OLFM2O95897 454 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 NMBRP28336 390 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 PPP3CCP48454 512 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 C5orf22Q49AR2 442 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 OTUD6BQ8N6M0 293 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 KIFC1Q9BW19 673 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 SLC13A1Q9BZW2 595 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 SMG9Q9H0W8 520 aaKnown RBP23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 PCMTD2Q9NV79 361 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 AGO1Q9UL18 857 aaKnown RBP23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 PLLPQ9Y342 182 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 CPQQ9Y646 472 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 MAGEB16A2A368 324 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 PMPCBO75439 489 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 F7P08709 466 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms