RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ANKRD6Q9Y2G4 727 aa14.61□□□□□ -0.07
HIF3A-202ENST00000244303 COL4A4P53420 1690 aaPredicted RBP14.6□□□□□ -0.07
HIF3A-202ENST00000244303 CASTOR2A6NHX0 329 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 PIGNO95427 931 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 AHSGP02765 367 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 ZCCHC18P0CG32 403 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 SLC35E2BP0CK96 405 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 EPHA3P29320 983 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 HADHAP40939 763 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 ZNF135P52742 658 aaPredicted RBP14.6□□□□□ -0.07
HIF3A-202ENST00000244303 CRHR2Q13324 411 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 FOXB2Q5VYV0 432 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 LINC00523Q86TU6 105 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 SLC41A1Q8IVJ1 513 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 RDH11Q8TC12 318 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 SCYL1Q96KG9 808 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 TSNARE1Q96NA8 513 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 SIK2Q9H0K1 926 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 NSMCE4AQ9NXX6 385 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 ETAA1Q9NY74 926 aa14.6□□□□□ -0.07
HIF3A-202ENST00000244303 RUVBL2Q9Y230 463 aaKnown RBP14.6□□□□□ -0.07
HIF3A-202ENST00000244303 HDAC3O15379 428 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 PGK1P00558 417 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 CTSHP09668 335 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 RPL14P50914 215 aaKnown RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 NAGLUP54802 743 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 INHBEP58166 350 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 ZNF460Q14592 562 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 POU6F1Q14863 301 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 LSM12Q3MHD2 195 aaKnown RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 SFT2D3Q587I9 215 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 ARL13AQ5H913 290 aaPredicted RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 PPM1LQ5SGD2 360 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 SEL1L3Q68CR1 1132 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 SAPCD2Q86UD0 394 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 DENND6AQ8IWF6 608 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 FSTL5Q8N475 847 aaPredicted RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 PPP2R3CQ969Q6 453 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 ZNF419Q96HQ0 510 aaPredicted RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 GBP5Q96PP8 586 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 TUBGCP5Q96RT8 1024 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 TBL1YQ9BQ87 522 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 NUF2Q9BZD4 464 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 CSNK1G1Q9HCP0 422 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 ZDHHC2Q9UIJ5 367 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 PACSIN3Q9UKS6 424 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 G3BP2Q9UN86 482 aaKnown RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 PTPRDP23468 1912 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 MIA3Q5JRA6 1907 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 AP3B1O00203 1094 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 AIM2O14862 343 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 CACNG3O60359 315 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 CABYRO75952 493 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 CHRNA1P02708 482 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 RAG1P15918 1043 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 BDNFP23560 247 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 PIK3R1P27986 724 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 PEX2P28328 305 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 NUDT2P50583 147 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 RAB27AP51159 221 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 SCNN1GP51170 649 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 COG7P83436 770 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 MPP1Q00013 466 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 CTBP1Q13363 440 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 SLC12A1Q13621 1099 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 HNRNPDQ14103 355 aaKnown RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 TIGD5Q53EQ6 642 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 PCID2Q5JVF3 399 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 CENPLQ8N0S6 344 aaPredicted RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 IPMKQ8NFU5 416 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 DQX1Q8TE96 717 aaKnown RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 TSGA13Q96PP4 275 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 RTP3Q9BQQ7 232 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 NEU3Q9UQ49 428 aa14.59□□□□□ -0.07
HIF3A-202ENST00000244303 AAR2Q9Y312 384 aaKnown RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 TDRD15B5MCY1 1934 aaKnown RBP14.59□□□□□ -0.07
HIF3A-202ENST00000244303 ARL5CA6NH57 179 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 PSMD3O43242 534 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 GRID2O43424 1007 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 SLC10A3P09131 477 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 DNAJB2P25686 324 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 PAN2Q504Q3 1202 aaKnown RBP14.58□□□□□ -0.08
HIF3A-202ENST00000244303 LRRC8EQ6NSJ5 796 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 PKN3Q6P5Z2 889 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 TMC7Q7Z402 723 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 SNX32Q86XE0 403 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 KLHDC8BQ8IXV7 354 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 GDPD5Q8WTR4 605 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 STYXQ8WUJ0 223 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 CNDP1Q96KN2 507 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 TRAPPC9Q96Q05 1148 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 FTHL17Q9BXU8 183 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 KLHL4Q9C0H6 718 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 CHST12Q9NRB3 414 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 ZDHHC7Q9NXF8 308 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 PDP2Q9P2J9 529 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 MRPL42Q9Y6G3 142 aaKnown RBP14.58□□□□□ -0.08
HIF3A-202ENST00000244303 H3BNX3 289 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 RNASEH1O60930 286 aaKnown RBP14.58□□□□□ -0.08
HIF3A-202ENST00000244303 DDHD2O94830 711 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms