RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FBXL19Q6PCT2 694 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 ATP6V0D2Q8N8Y2 350 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 VCPIP1Q96JH7 1222 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 SLC22A4Q9H015 551 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 POU2F3Q9UKI9 436 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 CHD2O14647 1828 aaKnown RBP13.03□□□□□ -0.32
VAMP4-201ENST00000236192 IL6P05231 212 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 ALDH4A1P30038 563 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 BTDP43251 543 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 TRIM71Q2Q1W2 868 aaKnown RBP13.03□□□□□ -0.32
VAMP4-201ENST00000236192 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 FAM20CQ8IXL6 584 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 DENND1AQ8TEH3 1009 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 SLC35B4Q969S0 331 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 MAELQ96JY0 434 aaKnown RBP13.03□□□□□ -0.32
VAMP4-201ENST00000236192 MSTO1Q9BUK6 570 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 SLC35C2Q9NQQ7 365 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
VAMP4-201ENST00000236192 NUP50Q9UKX7 468 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 GRIP1Q9Y3R0 1128 aa13.03□□□□□ -0.32
VAMP4-201ENST00000236192 ADAMTS13Q76LX8 1427 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 FAM149AA5PLN7 773 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 SNAP23O00161 211 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 RPL22P35268 128 aaKnown RBP13.02□□□□□ -0.32
VAMP4-201ENST00000236192 CHRNA2Q15822 529 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 FAM131AQ6UXB0 335 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 KIF18BQ86Y91 864 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 IFT43Q96FT9 208 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 HOPXQ9BPY8 73 aaPredicted RBP13.02□□□□□ -0.32
VAMP4-201ENST00000236192 PRRG3Q9BZD7 231 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 CATSPERZQ9NTU4 200 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 CD3EAPO15446 510 aaKnown RBP13.02□□□□□ -0.32
VAMP4-201ENST00000236192 AIREO43918 545 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 ABCB7O75027 752 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 TSPAN19P0C672 248 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 NAT2P11245 290 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 CKMT2P17540 419 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 RCVRNP35243 200 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 BHLHB9Q6PI77 547 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 TTYH2Q9BSA4 534 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 MUC13Q9H3R2 512 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 PIF1Q9H611 641 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 PI4KBQ9UBF8 816 aa13.02□□□□□ -0.32
VAMP4-201ENST00000236192 RGS10O43665 173 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 CD4P01730 458 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 GPIP06744 558 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 PGAM1P18669 254 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.33
VAMP4-201ENST00000236192 C1DQ13901 141 aaKnown RBP13.02□□□□□ -0.33
VAMP4-201ENST00000236192 AGAP9Q5VTM2 703 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 BPHLQ86WA6 291 aaPredicted RBP13.02□□□□□ -0.33
VAMP4-201ENST00000236192 SPPL2CQ8IUH8 684 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 EPS8L1Q8TE68 723 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 SENP6Q9GZR1 1112 aaPredicted RBP13.02□□□□□ -0.33
VAMP4-201ENST00000236192 GMPPBQ9Y5P6 360 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 MYH8P13535 1937 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 DENND3A2RUS2 1198 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 G3V2T6 193 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 ALX3O95076 343 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 PTTG1O95997 202 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
VAMP4-201ENST00000236192 SKIV2LQ15477 1246 aaKnown RBP13.02□□□□□ -0.33
VAMP4-201ENST00000236192 FGD3Q5JSP0 725 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 RFPL4BQ6ZWI9 263 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 KRT74Q7RTS7 529 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 RELL1Q8IUW5 271 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 MICALL2Q8IY33 904 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 PJA1Q8NG27 643 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 ELMO1Q92556 727 aa13.02□□□□□ -0.33
VAMP4-201ENST00000236192 SLIT1O75093 1534 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 HUS1O60921 280 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 YAP1P46937 504 aaKnown RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 BTBD16Q32M84 506 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 ATP6AP1LQ52LC2 224 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 PROSER1Q86XN7 944 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 SCML4Q8N228 414 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 MCOLN3Q8TDD5 553 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 PMEPA1Q969W9 287 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 ACOT9Q9Y305 439 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 EFCAB9A8MZ26 197 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 CYB561D2O14569 222 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 HAT1O14929 419 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 FAM163BP0C2L3 166 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 AVPR1AP37288 418 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 SLC15A1P46059 708 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 NCF4Q15080 339 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 TPRG1LQ5T0D9 272 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 SIGIRRQ6IA17 410 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 ALPK1Q96QP1 1244 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 MND1Q9BWT6 205 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 LRRC40Q9H9A6 602 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 TESMINQ9Y4I5 508 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 UMPSP11172 480 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 POU5F1Q01860 360 aaKnown RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 TIGD7Q6NT04 549 aaPredicted RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms