RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CFAP36Q96G28 342 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 ZFYVE19Q96K21 471 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 TTC25Q96NG3 672 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 S1PR5Q9H228 398 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 CLDND1Q9NY35 253 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 AAR2Q9Y312 384 aaKnown RBP18.88■□□□□ 0.61
SNX17-201ENST00000233575 ERI2A8K979 691 aaKnown RBP18.88■□□□□ 0.61
SNX17-201ENST00000233575 RRP9O43818 475 aaKnown RBP18.88■□□□□ 0.61
SNX17-201ENST00000233575 MT-CO1P00395 513 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 MLNP12872 115 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 TYRP14679 529 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 SLCO1A2P46721 670 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 PCSK7Q16549 785 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 LONRF1Q17RB8 773 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 PALM2Q8IXS6 379 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 LMLNQ96KR4 655 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 MRGPRX2Q96LB1 330 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 NSMCE3Q96MG7 304 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 SEMA3CQ99985 751 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 LRRC40Q9H9A6 602 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 KIF9Q9HAQ2 790 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 CASS4Q9NQ75 786 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 SYBUQ9NX95 663 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 COLQQ9Y215 455 aaPredicted RBP18.88■□□□□ 0.61
SNX17-201ENST00000233575 MAD1L1Q9Y6D9 718 aa18.88■□□□□ 0.61
SNX17-201ENST00000233575 TRIM24O15164 1050 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 ANXA9O76027 345 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 TPH1P17752 444 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 FCARP24071 287 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 OAS2P29728 719 aaKnown RBP18.87■□□□□ 0.61
SNX17-201ENST00000233575 WEE1P30291 646 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 LTBRP36941 435 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 TTMPQ5BVD1 217 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 DNAJC21Q5F1R6 531 aaKnown RBP18.87■□□□□ 0.61
SNX17-201ENST00000233575 KDELC1Q6UW63 502 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 C3orf62Q6ZUJ4 267 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 ATP11CQ8NB49 1132 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 FICDQ9BVA6 458 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 ABCB8Q9NUT2 735 aa18.87■□□□□ 0.61
SNX17-201ENST00000233575 DUS2Q9NX74 493 aaKnown RBP18.87■□□□□ 0.61
SNX17-201ENST00000233575 KIAA1522Q9P206 1035 aaPredicted RBP18.87■□□□□ 0.61
SNX17-201ENST00000233575 PRUNE2Q8WUY3 3088 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 K7ERQ8 282 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 CPP00450 1065 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 ABHD2P08910 425 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 HOXB8P17481 243 aaPredicted RBP18.86■□□□□ 0.61
SNX17-201ENST00000233575 ADRA1AP35348 466 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 GEMP55040 296 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 CTC1Q2NKJ3 1217 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 KRT71Q3SY84 523 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 NAT16Q8N8M0 369 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 DNAAF3Q8N9W5 541 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 DCAF4L2Q8NA75 395 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 PSKH2Q96QS6 385 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 EBNA1BP2Q99848 306 aaKnown RBP18.86■□□□□ 0.61
SNX17-201ENST00000233575 TBL1YQ9BQ87 522 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 CINPQ9BW66 212 aaPredicted RBP18.86■□□□□ 0.61
SNX17-201ENST00000233575 POLR1EQ9GZS1 481 aaKnown RBP18.86■□□□□ 0.61
SNX17-201ENST00000233575 CENPHQ9H3R5 247 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 GDE1Q9NZC3 331 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 ZC3H7BQ9UGR2 993 aaKnown RBP18.86■□□□□ 0.61
SNX17-201ENST00000233575 SEPT3Q9UH03 358 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 MIA3Q5JRA6 1907 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 TLDC2A0PJX2 215 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 HEPACAM2A8MVW5 462 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 TMCC1O94876 653 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 CHRNA4P43681 627 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 EIF3BP55884 814 aaKnown RBP18.86■□□□□ 0.61
SNX17-201ENST00000233575 WNT3AP56704 352 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 EFTUD2Q15029 972 aaKnown RBP eCLIP18.86■□□□□ 0.616e-8■■■■□ 26.1
SNX17-201ENST00000233575 EML3Q32P44 896 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 PLEKHG6Q3KR16 790 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 ATAT1Q5SQI0 421 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 CERCAMQ5T4B2 595 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 TANGO2Q6ICL3 276 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 CCDC117Q8IWD4 279 aaPredicted RBP18.86■□□□□ 0.61
SNX17-201ENST00000233575 BPIFB1Q8TDL5 484 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 OSCP1Q8WVF1 389 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 FAM161BQ96MY7 647 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 MYADMQ96S97 322 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 MGME1Q9BQP7 344 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 MED4Q9NPJ6 270 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 OGFRQ9NZT2 677 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 LMCD1Q9NZU5 365 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 CDH7Q9ULB5 785 aa18.86■□□□□ 0.61
SNX17-201ENST00000233575 FCF1Q9Y324 198 aaKnown RBP18.86■□□□□ 0.61
SNX17-201ENST00000233575 MYLKQ15746 1914 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 A0A087WUV0 522 aaPredicted RBP18.85■□□□□ 0.61
SNX17-201ENST00000233575 GOLGA6CA6NDK9 693 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 SDR42E2A6NKP2 422 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 CYP17A1P05093 508 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 GOLGA6DP0CG33 693 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 SKOR1P84550 965 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 GPS2Q13227 327 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 DHCR24Q15392 516 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 FUT11Q495W5 492 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 HSP90B2PQ58FF3 399 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 KCTD16Q68DU8 428 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 NAPEPLDQ6IQ20 393 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 DENND5AQ6IQ26 1287 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms