RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 HMG20AQ9NP66 347 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 MORF4L1Q9UBU8 362 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 RGSL1A5PLK6 1076 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 FOXO6A8MYZ6 492 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 PSMD11O00231 422 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 KLHL18O94889 574 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 LINC00032P0C843 101 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 SLURP2P0DP57 97 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 GCNT7Q6ZNI0 430 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 PROX1Q92786 737 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 MRPL48Q96GC5 212 aaKnown RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 FAM126AQ9BYI3 521 aaPredicted RBP13.53□□□□□ -0.24
NEK4-201ENST00000233027 ACSS2Q9NR19 701 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 ETAA1Q9NY74 926 aa13.53□□□□□ -0.24
NEK4-201ENST00000233027 STX4Q12846 297 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 CYP20A1Q6UW02 462 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 MAML3Q96JK9 1138 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 VAT1Q99536 393 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 LGMNQ99538 433 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 ZDHHC6Q9H6R6 413 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 TOR4AQ9NXH8 423 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 TRIM38O00635 465 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 PAPSS1O43252 624 aaPredicted RBP13.52□□□□□ -0.24
NEK4-201ENST00000233027 SERPINA6P08185 405 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 ITGA2BP08514 1039 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 TNNI3P19429 210 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 ATAD3BQ5T9A4 648 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 LLGL2Q6P1M3 1020 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 TPGS1Q6ZTW0 290 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 MARK2Q7KZI7 788 aaKnown RBP13.52□□□□□ -0.24
NEK4-201ENST00000233027 TMEM161BQ8NDZ6 487 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 FNIP1Q8TF40 1166 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 SENP8Q96LD8 212 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 ARL8BQ9NVJ2 186 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.52□□□□□ -0.24
NEK4-201ENST00000233027 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.52□□□□□ -0.24
NEK4-201ENST00000233027 NFASCO94856 1347 aa13.52□□□□□ -0.24
NEK4-201ENST00000233027 HOXA2O43364 376 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 IGSF6O95976 241 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 CNPP09543 421 aaKnown RBP13.52□□□□□ -0.25
NEK4-201ENST00000233027 VAV1P15498 845 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 RETSATQ6NUM9 610 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 SELENOMQ8WWX9 145 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 REXO5Q96IC2 774 aaKnown RBP13.52□□□□□ -0.25
NEK4-201ENST00000233027 STARD7Q9NQZ5 370 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 MROH2AA6NES4 1674 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.25
NEK4-201ENST00000233027 ZBTB14O43829 449 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 CAPN1P07384 714 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 TFEBP19484 476 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 TKTP29401 623 aaKnown RBP13.52□□□□□ -0.25
NEK4-201ENST00000233027 GSTM5P46439 218 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 TGM3Q08188 693 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 USP4Q13107 963 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 CTBP1Q13363 440 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 ARMC12Q5T9G4 340 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 GPR107Q5VW38 600 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 NPAS2Q99743 824 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 SLC9A8Q9Y2E8 581 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 ADCY6O43306 1168 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 PSMA3P25788 255 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 ABL2P42684 1182 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 LPCAT4Q643R3 524 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 OR5B17Q8NGF7 314 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 CENPIQ92674 756 aaPredicted RBP13.52□□□□□ -0.25
NEK4-201ENST00000233027 NUAK2Q9H093 628 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 TMEM134Q9H6X4 195 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 ABCC13Q9NSE7 274 aa13.52□□□□□ -0.25
NEK4-201ENST00000233027 C15orf38-AP3S2A0A0A6YYH1 394 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 FAM155BO75949 473 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 CCNB1P14635 433 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 UBA1P22314 1058 aaKnown RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 BEX3Q00994 111 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 DGKZQ13574 1117 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 SPESP1Q6UW49 350 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 CRELD2Q6UXH1 353 aaPredicted RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 ARPINQ7Z6K5 226 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ZNF410Q86VK4 478 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 IZUMO1Q8IYV9 350 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 KIAA0319LQ8IZA0 1049 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 C12orf29Q8N999 325 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 STN1Q9H668 368 aaKnown RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 SNX15Q9NRS6 342 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 PCDHAC2Q9Y5I4 1007 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 N6AMT1Q9Y5N5 214 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 LYVE1Q9Y5Y7 322 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ATP6AP2A0A1C7CYW4 349 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 WNT10BO00744 389 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ATP6AP2O75787 350 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 LGALS2P05162 132 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 RAB10P61026 200 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 NOMO3P69849 1222 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 FAM187BQ17R55 369 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 CCDC157Q569K6 752 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 STXBP5Q5T5C0 1151 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 COMMD2Q86X83 199 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ZC3H7AQ8IWR0 971 aaKnown RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 OR7A2PQ8NGA2 310 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms