RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 MAGEA11P43364 429 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ZNF135P52742 658 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 LBX1P52954 281 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 PPP2R2AP63151 447 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 GNGT1P63211 74 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 IFI35P80217 286 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 RELBQ01201 579 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 SEMA3BQ13214 749 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 AUHQ13825 339 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 GALEQ14376 348 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 KCNJ11Q14654 390 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 STAT4Q14765 748 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 PAFAH1B3Q15102 231 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 BRMS1LQ5PSV4 323 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ANKRD20A2Q5SQ80 823 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ANKRD20A1Q5TYW2 823 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ANKRD20A3Q5VUR7 823 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 KDM7AQ6ZMT4 941 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 NEK10Q6ZWH5 1172 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 BEND5Q7L4P6 421 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TAOK1Q7L7X3 1001 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TREML1Q86YW5 311 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 SLC44A2Q8IWA5 706 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 BRSK1Q8TDC3 778 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 DEPDC1BQ8WUY9 529 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ARHGEF2Q92974 986 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 CELF6Q96J87 481 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 SERPINB12Q96P63 405 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TSGA13Q96PP4 275 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 QKIQ96PU8 341 aaKnown RBP eCLIP5.5□□□□□ -1.531e-6■■■■□ 26.5
TRAPPC13-201ENST00000231526 YME1L1Q96TA2 773 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 SELENOSQ9BQE4 189 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 NACA2Q9H009 215 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 STMN4Q9H169 189 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 RABEP2Q9H5N1 569 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TLR8Q9NR97 1041 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 UBP1Q9NZI7 540 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 KLHL8Q9P2G9 620 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 PPT2Q9UMR5 302 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 PHTF1Q9UMS5 762 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 MSRB2Q9Y3D2 182 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 A0A0A0MRY4 1105 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 C5orf60A6NFR6 353 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 RNF103O00237 685 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 NCAM2O15394 837 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ADAM12O43184 909 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 GCATO75600 419 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 AGTP01019 485 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TIMP1P01033 207 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 IGLV3-25P01717 112 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 PYGLP06737 847 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 HMBSP08397 361 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 MX2P20592 715 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ATP5DP30049 168 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 PHBP35232 272 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ELK3P41970 407 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 RPL10AP62906 217 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TLR1Q15399 786 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TAF12Q16514 161 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TM4SF20Q53R12 229 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TJAP1Q5JTD0 557 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 C10orf120Q5SQS8 335 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ZNF295-AS1Q8N0V1 137 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ARHGAP18Q8N392 663 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 NPWQ8N729 165 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ANKLE1Q8NAG6 615 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ATP11CQ8NB49 1132 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 COLGALT1Q8NBJ5 622 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 DHRS1Q96LJ7 313 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 SPATA13Q96N96 652 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 ZNF558Q96NG5 402 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 HAPLN3Q96S86 360 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TRIM8Q9BZR9 551 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 CWH43Q9H720 699 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 CATSPERBQ9H7T0 1116 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 MPP6Q9NZW5 540 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 RSPH14Q9UHP6 348 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TTLL3Q9Y4R7 772 aa5.5□□□□□ -1.53
TRAPPC13-201ENST00000231526 TRIM43BA6NCK2 446 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 A6NNZ2 444 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MYO1CO00159 1063 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 DFFAO00273 331 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 EIF3HO15372 352 aaKnown RBP eCLIP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TBC1D4O60343 1298 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TLR5O60602 858 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 SKAP2O75563 359 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ADH1BP00325 375 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 APOEP02649 317 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 SOD2P04179 222 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 HAPLN1P10915 354 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 RFC2P35250 354 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ATP6V1E1P36543 226 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 GARSP41250 739 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 HCAR3P49019 387 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TUFMP49411 452 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 GLUD2P49448 558 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 WDR5P61964 334 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 SARNPP82979 210 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 EIF4EBP2Q13542 120 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 PPP2R5DQ14738 602 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms