RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PLEKHH3Q7Z736 793 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 SETD3Q86TU7 594 aaPredicted RBP16.52■□□□□ 0.23
LTBR-201ENST00000228918 SLC41A1Q8IVJ1 513 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 CNTN4Q8IWV2 1026 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 FSTL5Q8N475 847 aaPredicted RBP16.52■□□□□ 0.23
LTBR-201ENST00000228918 KYQ8NBH2 561 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 SCYL1Q96KG9 808 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 NUF2Q9BZD4 464 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 TRIM4Q9C037 500 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 PACSIN3Q9UKS6 424 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 PSMD13Q9UNM6 376 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 TBC1D30Q9Y2I9 924 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.23
LTBR-201ENST00000228918 MEIS3P2A8K0S8 358 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 DDHD2O94830 711 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 AHSGP02765 367 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 COL6A2P12110 1019 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 VCLP18206 1134 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 TFEBP19484 476 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 DNAJB1P25685 340 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 NAGLUP54802 743 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 ZNF33AQ06730 810 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 GRM2Q14416 872 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 MAP3K21Q5TCX8 1036 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 TLK2Q86UE8 772 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 TAC4Q86UU9 113 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 ST13P4Q8IZP2 240 aaPredicted RBP16.51■□□□□ 0.23
LTBR-201ENST00000228918 DSELQ8IZU8 1212 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 LSMEM2Q8N112 164 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 USP33Q8TEY7 942 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 BRI3BPQ8WY22 251 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 SERPINI1Q99574 410 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 IRAK4Q9NWZ3 460 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 VTI1BQ9UEU0 232 aa16.51■□□□□ 0.23
LTBR-201ENST00000228918 RUVBL2Q9Y230 463 aaKnown RBP16.51■□□□□ 0.23
LTBR-201ENST00000228918 SLCO1B7G3V0H7 640 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 ADSLP30566 484 aaPredicted RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 COG7P83436 770 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 UGP2Q16851 508 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 PCID2Q5JVF3 399 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 PKN3Q6P5Z2 889 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 BNC2Q6ZN30 1099 aaPredicted RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 PQLC1Q8N2U9 271 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 SPATA22Q8NHS9 363 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 EZH1Q92800 747 aaPredicted RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 SMARCD1Q96GM5 515 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 BTBD9Q96Q07 612 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 TBL1YQ9BQ87 522 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 C6orf203Q9P0P8 240 aaPredicted RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 XPR1Q9UBH6 696 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 VPS28Q9UK41 221 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 G3BP2Q9UN86 482 aaKnown RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 NEU3Q9UQ49 428 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 CDYLQ9Y232 598 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 PGK1P00558 417 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 JUNP05412 331 aaKnown RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 SRGAP2BP0DMP2 458 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 EPHX2P34913 555 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 THOP1P52888 689 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 POLE2P56282 527 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 MPP1Q00013 466 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 CYLC2Q14093 348 aaPredicted RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 HERC3Q15034 1050 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 GRAMD1BQ3KR37 738 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 MMEL1Q495T6 779 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 LIN52Q52LA3 116 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 PIGGQ5H8A4 983 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 ARHGAP36Q6ZRI8 547 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 SDCCAG8Q86SQ7 713 aaPredicted RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 ARHGAP18Q8N392 663 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.5■□□□□ 0.23
LTBR-201ENST00000228918 RCN3Q96D15 328 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 CATSPER2Q96P56 530 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 CENPKQ9BS16 269 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 RHOBTB2Q9BYZ6 727 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 SLC38A7Q9NVC3 462 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 CDH9Q9ULB4 789 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 INPP5FQ9Y2H2 1132 aa16.5■□□□□ 0.23
LTBR-201ENST00000228918 AAR2Q9Y312 384 aaKnown RBP16.5■□□□□ 0.23
LTBR-201ENST00000228918 DLX3O60479 287 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 ALDH1A3P47895 512 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 ZNF460Q14592 562 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 ZNF423Q2M1K9 1284 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 TMEM198Q66K66 360 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 FBXL19Q6PCT2 694 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 ANKRD23Q86SG2 305 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 MFSD6LQ8IWD5 586 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 DENND6AQ8IWF6 608 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 C3orf58Q8NDZ4 430 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 ZNF419Q96HQ0 510 aaPredicted RBP16.49■□□□□ 0.23
LTBR-201ENST00000228918 GPR78Q96P69 363 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 ACOT9Q9Y305 439 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 DTNAQ9Y4J8 743 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 MT-CYBP00156 380 aaPredicted RBP16.49■□□□□ 0.23
LTBR-201ENST00000228918 CLCNKBP51801 687 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 RAB10P61026 200 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 POU6F1Q14863 301 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 TSTD2Q5T7W7 516 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 OLFML2BQ68BL8 750 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms