RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FBXO39Q8N4B4 442 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 FAM81AQ8TBF8 368 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 GPR152Q8TDT2 470 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 GFM2Q969S9 779 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 CCDC126Q96EE4 140 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ZFRQ96KR1 1074 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 TBL1YQ9BQ87 522 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SLC39A3Q9BRY0 314 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 TXLNGYQ9BZA5 131 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 TMEM233B4DJY2 109 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 BTN3A1O00481 513 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 DEAF1O75398 565 aaPredicted RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 MYL4P12829 197 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 NPR3P17342 541 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 MAGP20916 626 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 MATKP42679 507 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 C21orf59P57076 290 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 NRG1Q02297 640 aaPredicted RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 MOGSQ13724 837 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 GALNT15Q8N3T1 639 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 WWOXQ9NZC7 414 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 VTI1BQ9UEU0 232 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 EFR3BQ9Y2G0 817 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 U3KQV3 271 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 B4GALT4O60513 344 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 DLDP09622 509 aaKnown RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 XRCC1P18887 633 aaPredicted RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 POU1F1P28069 291 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 PSEN1P49768 467 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 SLC10A6Q3KNW5 377 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 LIPMQ5VYY2 423 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 LCLAT1Q6UWP7 414 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 ACMSDQ8TDX5 336 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 FBXL18Q96ME1 805 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 ARHGEF4Q9NR80 690 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 VPS45Q9NRW7 570 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 LRRC42Q9Y546 428 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 MAP1BP46821 2468 aaKnown RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 SMIM31A0A1B0GVY4 71 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 RRN3P2A6NIE6 340 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 DNAJA2O60884 412 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 H2AFYO75367 372 aaKnown RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 RPS12P25398 132 aaKnown RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 NR1H2P55055 460 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 CDH15P55291 814 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 HERC6Q8IVU3 1022 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 RP9Q8TA86 221 aaKnown RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 HDAC10Q969S8 669 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 MTFMTQ96DP5 389 aaKnown RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 FAR2Q96K12 515 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 SLC38A7Q9NVC3 462 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 SMPD4Q9NXE4 827 aa13.91□□□□□ -0.18
NFKB1-201ENST00000226574 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 TDRKHQ9Y2W6 561 aaKnown RBP13.91□□□□□ -0.18
NFKB1-201ENST00000226574 CCDC189A1A4V9 331 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 NCAM2O15394 837 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 MSI1O43347 362 aaKnown RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 HS6ST1O60243 411 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 DLGAP3O95886 979 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 TPP2P29144 1249 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 ABL2P42684 1182 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 NUP107P57740 925 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 RAD51Q06609 339 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 TAF1CQ15572 869 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 FKBP1CQ5VVH2 108 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 MAP1SQ66K74 1059 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 AAGABQ6PD74 315 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 DRICH1Q6PGQ1 229 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 SPPL2CQ8IUH8 684 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 CMASQ8NFW8 434 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 NAT14Q8WUY8 206 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 LRTOMTQ8WZ04 291 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 PCDHGB4Q9UN71 923 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 TIMM22Q9Y584 194 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 HACD1B0YJ81 288 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 LIN7AO14910 233 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 NMBRP28336 390 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 SCNN1GP51170 649 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 THOP1P52888 689 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 FRG1Q14331 258 aaKnown RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 ARHGAP17Q68EM7 881 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 ESRP1Q6NXG1 681 aaKnown RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 TAGAPQ8N103 731 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 NAT16Q8N8M0 369 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 FNIP1Q8TF40 1166 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 MROH8Q9H579 483 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 A0A087WXM4 84 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 PPEF2O14830 753 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 OCM2P0CE71 109 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 OCMP0CE72 109 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 ATP5F1P24539 256 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 OR1E1P30953 314 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 ADRA1BP35368 520 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 ASPAP45381 313 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 EIF2B2P49770 351 aaKnown RBP13.9□□□□□ -0.18
NFKB1-201ENST00000226574 RAB10P61026 200 aa13.9□□□□□ -0.18
NFKB1-201ENST00000226574 ARHGEF7Q14155 803 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms