RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TTLL2Q9BWV7 592 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 ZYG11BQ9C0D3 744 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 MGRN1O60291 552 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 NTRK1P04629 796 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 FGFR3P22607 806 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 FAM46CQ5VWP2 391 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF276Q8N554 614 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 KIAA0895Q8NCT3 520 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 FBXO30Q8TB52 745 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 PDLIM2Q96JY6 352 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF354BQ96LW1 612 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 BRD9Q9H8M2 597 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 TMEM216Q9P0N5 145 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 BTBD7Q9P203 1132 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 GULP1Q9UBP9 304 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 DAPK2Q9UIK4 370 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 TMCO1Q9UM00 188 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 HES2Q9Y543 173 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 PTPRUQ92729 1446 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 MCIDASD6RGH6 385 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 PTGES3LE9PB15 166 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 NEDD8-MDP1E9PL57 170 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 WWP2O00308 870 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 FFAR3O14843 346 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 GPR42O15529 346 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 ANXA6P08133 673 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 GPR142Q7Z601 462 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CCDC185Q8N715 623 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 SETD9Q8NE22 299 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TNPO3Q9Y5L0 923 aaKnown RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 KPNA5O15131 536 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 PTPN4P29074 926 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 RPL9P32969 192 aaKnown RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 ABCG1P45844 678 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 NAB1Q13506 487 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 OR52K1Q8NGK4 314 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 OR8D1Q8WZ84 308 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 WNT8BQ93098 351 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TPRKBQ9Y3C4 175 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF780BQ9Y6R6 833 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 SNPHO15079 494 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CCL16O15467 120 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 FKBP6O75344 327 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 AVILO75366 819 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CLPTM1O96005 669 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CALCAP01258 141 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CSH1P0DML2 217 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CSH2P0DML3 217 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CLUP10909 449 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CD52P31358 61 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CHKAP35790 457 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 PTENP60484 403 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 RHAGQ02094 409 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 FAAP100Q0VG06 881 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 RNF148Q8N7C7 305 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 C1orf232A0A0U1RR37 186 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 MAGEC1O60732 1142 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 ECDO95905 644 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 FAM58BPP0C7Q3 252 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 ALOX12P18054 663 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 RPL21P46778 160 aaKnown RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 INHBEP58166 350 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CRADDP78560 199 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 AKIRIN2Q53H80 203 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CRTC3Q6UUV7 619 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CLEC17AQ6ZS10 378 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 ENKURQ8TC29 256 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 MCCC1Q96RQ3 725 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 SLC39A8Q9C0K1 460 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 IL17RBQ9NRM6 502 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3DA0A087WVF3 549 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3IA0A087WXS9 549 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3EA0A087X179 549 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3KA0A087X1G2 549 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3FA6NER0 549 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3LB9A6J9 549 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 ADH1CP00326 375 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3HP0C7X1 549 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 LRPAP1P30533 357 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 MAPK10P53779 464 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 PSMD5Q16401 504 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 PCID2Q5JVF3 399 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3GQ6DHY5 549 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3CQ6IPX1 549 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 PAGE2Q7Z2X7 111 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 TBC1D3Q8IZP1 549 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 OXNAD1Q96HP4 312 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-201ENST00000225964 NEK6Q9HC98 313 aa13.38□□□□□ -0.27
COL1A1-201ENST00000225964 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 UBA1P22314 1058 aaKnown RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 RAPSNQ13702 412 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 DPYSL3Q14195 570 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF697Q5TEC3 545 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 KIAA0319LQ8IZA0 1049 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 MAB21L3Q8N8X9 362 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms