RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 TNFRSF4P43489 277 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 LIMK1P53667 647 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 EIF3EP60228 445 aaKnown RBP16.72■□□□□ 0.27
LIM2-201ENST00000221973 ARF5P84085 180 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 ECT2LQ008S8 904 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 SULT2A1Q06520 285 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 EIF4HQ15056 248 aaKnown RBP16.72■□□□□ 0.27
LIM2-201ENST00000221973 NOMO1Q15155 1222 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 EMC10Q5UCC4 262 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 CREG2Q8IUH2 290 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 TTC13Q8NBP0 860 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 KIF18AQ8NI77 898 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 ATG4AQ8WYN0 398 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 RPL10LQ96L21 214 aaKnown RBP16.72■□□□□ 0.27
LIM2-201ENST00000221973 NAP1L3Q99457 506 aaPredicted RBP16.72■□□□□ 0.27
LIM2-201ENST00000221973 LGMNQ99538 433 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 ZDHHC4Q9NPG8 344 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 ACTL7AQ9Y615 435 aa16.72■□□□□ 0.27
LIM2-201ENST00000221973 H7C0C1 242 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 PPP1R12AO14974 1030 aaPredicted RBP16.71■□□□□ 0.27
LIM2-201ENST00000221973 MCF2LO15068 1137 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 FOXD2O60548 495 aaPredicted RBP16.71■□□□□ 0.27
LIM2-201ENST00000221973 PRAMEF11O60813 436 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 ASLP04424 464 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 ATP5OP48047 213 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 STK19P49842 368 aaPredicted RBP16.71■□□□□ 0.27
LIM2-201ENST00000221973 AP1B1Q10567 949 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 SIX1Q15475 284 aaPredicted RBP16.71■□□□□ 0.27
LIM2-201ENST00000221973 LRRC49Q8IUZ0 686 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 UCMAQ8WVF2 138 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 C1orf54Q8WWF1 131 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 ACDQ96AP0 544 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 HDAC11Q96DB2 347 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 AP1M1Q9BXS5 423 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 C10orf88Q9H8K7 445 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 SLC25A13Q9UJS0 675 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 ERVW-1Q9UQF0 538 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 PCDHGA5Q9Y5G8 931 aa16.71■□□□□ 0.27
LIM2-201ENST00000221973 DOCK4Q8N1I0 1966 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 MT-CO1P00395 513 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 DLDP09622 509 aaKnown RBP16.7■□□□□ 0.26
LIM2-201ENST00000221973 TIE1P35590 1138 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 MPLP40238 635 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 PAFAH1B1P43034 410 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 IL10RBQ08334 325 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 PPIDQ08752 370 aaKnown RBP16.7■□□□□ 0.26
LIM2-201ENST00000221973 SNX1Q13596 522 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 PTPRNQ16849 979 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 C2orf27AQ580R0 203 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 EGFLAMQ63HQ2 1017 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 TCEAL6Q6IPX3 200 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 RETSATQ6NUM9 610 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 RASSF3Q86WH2 238 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 CCDC13Q8IYE1 715 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 ATP11CQ8NB49 1132 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 TFB1MQ8WVM0 346 aaKnown RBP16.7■□□□□ 0.26
LIM2-201ENST00000221973 TCEAL3Q969E4 200 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 MRGPRX3Q96LB0 322 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 TSGA13Q96PP4 275 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 PDFQ9HBH1 243 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 UBA2Q9UBT2 640 aaPredicted RBP16.7■□□□□ 0.26
LIM2-201ENST00000221973 HCN2Q9UL51 889 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 PLA2G4CQ9UP65 541 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 STARD13Q9Y3M8 1113 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 FRYQ5TBA9 3013 aa16.7■□□□□ 0.26
LIM2-201ENST00000221973 MAP1BP46821 2468 aaKnown RBP16.7■□□□□ 0.26
LIM2-201ENST00000221973 ASPMQ8IZT6 3477 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 ZSCAN5CA6NGD5 496 aaPredicted RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 K7ERQ8 282 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 PDE2AO00408 941 aaPredicted RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 KRIT1O00522 736 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 CD160O95971 181 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 SRPRAP08240 638 aaKnown RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 RBP3P10745 1247 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 CCNCP24863 283 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 KIR2DL1P43626 348 aaPredicted RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 XRCC4Q13426 336 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 PRKD1Q15139 912 aaPredicted RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 AASDHQ4L235 1098 aaPredicted RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 FNDC3BQ53EP0 1204 aaKnown RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 SLC45A4Q5BKX6 768 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 TIGD7Q6NT04 549 aaPredicted RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 DARS2Q6PI48 645 aaKnown RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 TMEM92Q6UXU6 159 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 ZNF513Q8N8E2 541 aaPredicted RBP16.69■□□□□ 0.26
LIM2-201ENST00000221973 PRELID2Q8N945 189 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 SLC35B2Q8TB61 432 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 QKIQ96PU8 341 aaKnown RBP eCLIP16.69■□□□□ 0.26
LIM2-201ENST00000221973 TPSD1Q9BZJ3 242 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 BRD8Q9H0E9 1235 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 RNF14Q9UBS8 474 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 SLCO3A1Q9UIG8 710 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 CDC23Q9UJX2 597 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 DNPEPQ9ULA0 475 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 MMP17Q9ULZ9 603 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 INVSQ9Y283 1065 aa16.69■□□□□ 0.26
LIM2-201ENST00000221973 HACD1B0YJ81 288 aa16.68■□□□□ 0.26
LIM2-201ENST00000221973 KCNK1O00180 336 aa16.68■□□□□ 0.26
LIM2-201ENST00000221973 LIASO43766 372 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms