RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 WDR24Q96S15 920 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 FAM129BQ96TA1 746 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 LGMNQ99538 433 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 MKRN2Q9H000 416 aaKnown RBP24.02■■□□□ 1.44
HOMER3-201ENST00000221222 RSPH9Q9H1X1 276 aaPredicted RBP24.02■■□□□ 1.44
HOMER3-201ENST00000221222 TNKS2Q9H2K2 1166 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 EBF1Q9UH73 591 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 MCF2LO15068 1137 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 ALOX15BO15296 676 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 GSRP00390 522 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 LMNAP02545 664 aaKnown RBP24.01■■□□□ 1.43
HOMER3-201ENST00000221222 SLC10A7Q0GE19 358 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 XRCC4Q13426 336 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 PRKD1Q15139 912 aaPredicted RBP24.01■■□□□ 1.43
HOMER3-201ENST00000221222 ZNF528Q3MIS6 628 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 CARD16Q5EG05 197 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 SLC13A5Q86YT5 568 aaPredicted RBP24.01■■□□□ 1.43
HOMER3-201ENST00000221222 TEX26Q8N6G2 289 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 TTC13Q8NBP0 860 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 OR2AP1Q8NGE2 309 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 NSMCE1Q8WV22 266 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 HAUS1Q96CS2 278 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 ERLEC1Q96DZ1 483 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 PSKH2Q96QS6 385 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 LHX3Q9UBR4 397 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 SEPT3Q9UH03 358 aa24.01■■□□□ 1.43
HOMER3-201ENST00000221222 CCDC163A0A0D9SF12 145 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 ZBTB24O43167 697 aaPredicted RBP24■■□□□ 1.43
HOMER3-201ENST00000221222 NDUFV2P19404 249 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 CXCR5P32302 372 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 RECQLP46063 649 aaPredicted RBP24■■□□□ 1.43
HOMER3-201ENST00000221222 RHOAP61586 193 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 OTUD4Q01804 1114 aaKnown RBP24■■□□□ 1.43
HOMER3-201ENST00000221222 CSTF1Q05048 431 aaKnown RBP24■■□□□ 1.43
HOMER3-201ENST00000221222 MARC1Q5VT66 337 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 ANO7Q6IWH7 933 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 TSSK4Q6SA08 328 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 TMPRSS6Q8IU80 811 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 STK40Q8N2I9 435 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 MDGA1Q8NFP4 955 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 ACTL9Q8TC94 416 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 HMGB4Q8WW32 186 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 OR8D1Q8WZ84 308 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 PBKQ96KB5 322 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 MRGPRX1Q96LB2 322 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 CINPQ9BW66 212 aaPredicted RBP24■■□□□ 1.43
HOMER3-201ENST00000221222 FAM126AQ9BYI3 521 aaPredicted RBP24■■□□□ 1.43
HOMER3-201ENST00000221222 TM6SF2Q9BZW4 377 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 SNX12Q9UMY4 172 aa24■■□□□ 1.43
HOMER3-201ENST00000221222 FARP1Q9Y4F1 1045 aaPredicted RBP24■■□□□ 1.43
HOMER3-201ENST00000221222 TCRBV7S2A1N4TA0A589 114 aa23.99■■□□□ 1.43
HOMER3-201ENST00000221222 HACD1B0YJ81 288 aa23.99■■□□□ 1.43
HOMER3-201ENST00000221222 RENBPP51606 427 aa23.99■■□□□ 1.43
HOMER3-201ENST00000221222 SNRPD1P62314 119 aaKnown RBP23.99■■□□□ 1.43
HOMER3-201ENST00000221222 ZC3H14Q6PJT7 736 aaKnown RBP23.99■■□□□ 1.43
HOMER3-201ENST00000221222 DPY19L3Q6ZPD9 716 aa23.99■■□□□ 1.43
HOMER3-201ENST00000221222 TSEN2Q8NCE0 465 aaKnown RBP23.99■■□□□ 1.43
HOMER3-201ENST00000221222 LRRN4Q8WUT4 740 aa23.99■■□□□ 1.43
HOMER3-201ENST00000221222 TFB1MQ8WVM0 346 aaKnown RBP23.99■■□□□ 1.43
HOMER3-201ENST00000221222 NELL1Q92832 810 aa23.99■■□□□ 1.43
HOMER3-201ENST00000221222 GDAP1L1Q96MZ0 367 aa23.99■■□□□ 1.43
HOMER3-201ENST00000221222 EML5Q05BV3 1969 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 BNIP3LO60238 219 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 RNASEH1O60930 286 aaKnown RBP23.98■■□□□ 1.43
HOMER3-201ENST00000221222 IGSF6O95976 241 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 CCNB1P14635 433 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 HSPA9P38646 679 aaKnown RBP23.98■■□□□ 1.43
HOMER3-201ENST00000221222 CSNK1DP48730 415 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 CCNHP51946 323 aaPredicted RBP23.98■■□□□ 1.43
HOMER3-201ENST00000221222 IFI35P80217 286 aaPredicted RBP23.98■■□□□ 1.43
HOMER3-201ENST00000221222 NSUN2Q08J23 767 aaKnown RBP eCLIP23.98■■□□□ 1.43
HOMER3-201ENST00000221222 AP1B1Q10567 949 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 ZNF235Q14590 738 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 ZNF776Q68DI1 518 aaPredicted RBP23.98■■□□□ 1.43
HOMER3-201ENST00000221222 DSG4Q86SJ6 1040 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 BBS5Q8N3I7 341 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 ZNF419Q96HQ0 510 aaPredicted RBP23.98■■□□□ 1.43
HOMER3-201ENST00000221222 QKIQ96PU8 341 aaKnown RBP eCLIP23.98■■□□□ 1.43
HOMER3-201ENST00000221222 HINFPQ9BQA5 517 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 AMACRQ9UHK6 382 aa23.98■■□□□ 1.43
HOMER3-201ENST00000221222 ZNF292O60281 2723 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 CES2O00748 559 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 CEP104O60308 925 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 MMP13P45452 471 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 NRLP54845 237 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 RPS14P62263 151 aaKnown RBP23.97■■□□□ 1.43
HOMER3-201ENST00000221222 ZBTB16Q05516 673 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 SLC45A4Q5BKX6 768 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 ZC3H18Q86VM9 953 aaKnown RBP23.97■■□□□ 1.43
HOMER3-201ENST00000221222 RASGEF1CQ8N431 466 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 CHST14Q8NCH0 376 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 PRCCQ92733 491 aaPredicted RBP23.97■■□□□ 1.43
HOMER3-201ENST00000221222 SIPA1Q96FS4 1042 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 OSBPL9Q96SU4 736 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 IL12RB2Q99665 862 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 NAPGQ99747 312 aaPredicted RBP23.97■■□□□ 1.43
HOMER3-201ENST00000221222 SLC6A17Q9H1V8 727 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 SEMA4AQ9H3S1 761 aa23.97■■□□□ 1.43
HOMER3-201ENST00000221222 BCCIPQ9P287 314 aaKnown RBP eCLIP23.97■■□□□ 1.43
HOMER3-201ENST00000221222 PPM1HQ9ULR3 514 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms