RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 SNRPAP09012 282 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 NFKB1P19838 968 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 CD86P42081 329 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 DEFA1P59665 94 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 DEFA3P59666 94 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 WDR5P61964 334 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SYTL3Q4VX76 610 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 ARMC12Q5T9G4 340 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 HCSTQ9UBK5 93 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 E9PAM4 449 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SERPINI2O75830 405 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 PYGLP06737 847 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 MGAT1P26572 445 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SERPINB9P50453 376 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 FBXL19Q6PCT2 694 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 GRASPQ7Z6J2 395 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SETD3Q86TU7 594 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 COLGALT2Q8IYK4 626 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SLC22A17Q8WUG5 538 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 NSMCE4AQ9NXX6 385 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TEKT2Q9UIF3 430 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 AURKCQ9UQB9 309 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 INSL5Q9Y5Q6 135 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TRIM49D1C9J1S8 452 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TEX28O15482 410 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 ADH1CP00326 375 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SERPINA4P29622 427 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 RPL22P35268 128 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 AIF1P55008 147 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TRIM16LQ309B1 348 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 LVRNQ6Q4G3 990 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 ARHGAP22Q7Z5H3 698 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 CCNJLQ8IV13 435 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 P2RY11Q96G91 374 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 MAGEB18Q96M61 343 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 CYP2S1Q96SQ9 504 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 ADNPQ9H2P0 1102 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 MANSC1Q9H8J5 431 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 IARS2Q9NSE4 1012 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 R3HDM2Q9Y2K5 976 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 KIAA1551Q9HCM1 1747 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 GOLGA8TH3BQL2 631 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 MAP3K13O43283 966 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 RHOBTB1O94844 696 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 IL1BP01584 269 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 HIST1H2AGP0C0S8 130 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 PIRTP0C851 137 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 HIST1H2ADP20671 130 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 PAX7P23759 505 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 S100A5P33763 92 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 DSG4Q86SJ6 1040 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 C12orf76Q8N812 135 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 ZNF555Q8NEP9 628 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 AGR3Q8TD06 166 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 HIST1H2AHQ96KK5 128 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 RIPOR3Q96MK2 946 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 HIST1H2AJQ99878 128 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 H2AFJQ9BTM1 129 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 ASPSCR1Q9BZE9 553 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 ZFP14Q9HCL3 533 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 DTNAQ9Y4J8 743 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TCRBV7S2A1N4TA0A589 114 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 GJB5O95377 273 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 ITGALP20701 1170 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SSTR1P30872 391 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 BMPR1AP36894 532 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SNRPD1P62314 119 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SKOR1P84550 965 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TRADDQ15628 312 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TRIP4Q15650 581 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 PARP6Q2NL67 630 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 PLD5Q8N7P1 536 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 LRRC57Q8N9N7 239 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 TOP1MTQ969P6 601 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 SGF29Q96ES7 293 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 KCTD15Q96SI1 283 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 MRPL1Q9BYD6 325 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 PIGVQ9NUD9 493 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 KIF17Q9P2E2 1029 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 FAM50BQ9Y247 325 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 C15orf41Q9Y2V0 281 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 HBS1LQ9Y450 684 aaKnown RBP9.54□□□□□ -0.88
CCDC113-201ENST00000219299 AP4S1Q9Y587 144 aa9.54□□□□□ -0.88
CCDC113-201ENST00000219299 IRAK2O43187 625 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 VAPBO95292 243 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 HAPLN1P10915 354 aaPredicted RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 HOXD8P13378 290 aaPredicted RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 L1CAMP32004 1257 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 RPS24P62847 133 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 BTKQ06187 659 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 MRPL28Q13084 256 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 MPPE1Q53F39 396 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 PLD3Q8IV08 490 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 SH3RF2Q8TEC5 729 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 CASP10Q92851 521 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 ZNF333Q96JL9 665 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms