RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 FRS2Q8WU20 508 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 IL12RB2Q99665 862 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 CEP44Q9C0F1 390 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 KLHL8Q9P2G9 620 aaPredicted RBP27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 DRG1Q9Y295 367 aaKnown RBP27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 MUSKO15146 869 aa27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 ZNF821O75541 412 aaPredicted RBP27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 STK10O94804 968 aaKnown RBP27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 IFNB1P01574 187 aa27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 FNTAP49354 379 aa27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 VASPP50552 380 aaPredicted RBP27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 MAXP61244 160 aa27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 FZD5Q13467 585 aa27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 ATXN7L2Q5T6C5 722 aaPredicted RBP27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 ZNF572Q7Z3I7 529 aaPredicted RBP27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 PGBD5Q8N414 524 aa27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 PSKH2Q96QS6 385 aa27.69■■■□□ 2.02
CHMP4B-201ENST00000217402 NPC1O15118 1278 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 EPHX1P07099 455 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 NTSR1P30989 418 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 ITKQ08881 620 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 TEX44Q53QW1 395 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 PKN3Q6P5Z2 889 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 TRMT11Q7Z4G4 463 aaKnown RBP27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 PRUNE1Q86TP1 453 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 ZNF567Q8N184 647 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 CNTD1Q8N815 330 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 CCDC110Q8TBZ0 833 aa27.68■■■□□ 2.02
CHMP4B-201ENST00000217402 RGRP47804 291 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 HNRNPA1L2Q32P51 320 aaKnown RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 SDE2Q6IQ49 451 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 PCDH20Q8N6Y1 951 aaKnown RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 CCDC89Q8N998 374 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 OR6K2Q8NGY2 324 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 ATL2Q8NHH9 583 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 KRT12Q99456 494 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 SIT1Q9Y3P8 196 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 ATG2BQ96BY7 2078 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 TTC24A2A3L6 582 aaPredicted RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 F5H423 210 aaPredicted RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 ZBTB24O43167 697 aaPredicted RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 ADAM23O75077 832 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 GJB3O75712 270 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 ZNF189O75820 626 aaPredicted RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 STIP1P31948 543 aaKnown RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 ENPP2Q13822 863 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 PID1Q7Z2X4 250 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 SYNPOQ8N3V7 929 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 RYBPQ8N488 228 aaPredicted RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 ISG20Q96AZ6 181 aaKnown RBP27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 VAT1Q99536 393 aa27.67■■■□□ 2.02
CHMP4B-201ENST00000217402 EDDM13A0A1B0GTR0 161 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 TMEM221A6NGB7 291 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 M0R296 226 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 ETS1P14921 441 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 ANKRD20A2Q5SQ80 823 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 ANKRD20A1Q5TYW2 823 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 ANKRD20A3Q5VUR7 823 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 CWF19L1Q69YN2 538 aaKnown RBP27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 GLIS1Q8NBF1 620 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 MNS1Q8NEH6 495 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 PTPRN2Q92932 1015 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 TEKT5Q96M29 485 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 GDAP1L1Q96MZ0 367 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 SPATA13Q96N96 652 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 MGME1Q9BQP7 344 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 OSBPL6Q9BZF3 934 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 POLR3BQ9NW08 1133 aaPredicted RBP27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 AMACRQ9UHK6 382 aa27.66■■■□□ 2.02
CHMP4B-201ENST00000217402 SIN3BO75182 1162 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 IGSF6O95976 241 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 DCNP07585 359 aaKnown RBP27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 HOXB2P14652 356 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 RECQLP46063 649 aaPredicted RBP27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 LMNB2Q03252 620 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 OR2AP1Q8NGE2 309 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 RTP4Q96DX8 246 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 GABRG3Q99928 467 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 CARD6Q9BX69 1037 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 POLR1EQ9GZS1 481 aaKnown RBP27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 L2HGDHQ9H9P8 463 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 HAUS2Q9NVX0 235 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 ATP8A1Q9Y2Q0 1164 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 MYO18AQ92614 2054 aaKnown RBP27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 TECTAO75443 2155 aa27.65■■■□□ 2.02
CHMP4B-201ENST00000217402 CTAGE15A4D2H0 777 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 C5orf60A6NFR6 353 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 GSRP00390 522 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 ZSCAN5DPP0CG00 497 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 CTAGE8P0CG41 777 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 HSPA9P38646 679 aaKnown RBP27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 SCNN1BP51168 640 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 SNRPD1P62314 119 aaKnown RBP27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 TRIP13Q15645 432 aaPredicted RBP27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 CARD16Q5EG05 197 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 DPY19L3Q6ZPD9 716 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 CTAGE6Q86UF2 777 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 CTAGE4Q8IX94 777 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 TAB3Q8N5C8 712 aaPredicted RBP27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 OR2A12Q8NGT7 310 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms