RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Tbl3Q8C4J7 801 aaKnown RBP10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Lin52Q8CD94 116 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mrpl48Q8JZS9 211 aaKnown RBP10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Zdhhc12Q8VC90 267 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Evi2bQ8VD58 444 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Prpf19Q99KP6 504 aaKnown RBP10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mrpl9Q99N94 265 aaKnown RBP10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Use1Q9CQ56 270 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ergic3Q9CQE7 383 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ints11Q9CWS4 600 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Clec4aQ9QZ15 238 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 ChmlQ9QZD5 621 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tle6Q9WVB3 581 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gm5478D3Z6R0 159 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gm3526E9PZM0 191 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tcea3P23881 347 aaKnown RBP10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Anxa4P97429 319 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Otol1Q4ZJM7 482 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Nell2Q61220 819 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Lag3Q61790 521 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Zic5Q7TQ40 622 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Saysd1Q8K190 188 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tssk3Q9D2E1 268 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Dhx34Q9DBV3 1145 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Cyp2s1Q9DBX6 501 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Trpm5Q9JJH7 1158 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Piwil1Q9JMB7 862 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tjp3Q9QXY1 905 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Vnn3Q9QZ25 500 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ripor3A1L3T7 938 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Armt1A6H630 439 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 MndalD0QMC3 538 aaKnown RBP10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 FaahO08914 579 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Atp2c1Q80XR2 918 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gsdmc3Q8CB12 480 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Kdelr1Q99JH8 212 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Nipsnap3bQ9CQE1 247 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Oxct1Q9D0K2 520 aaKnown RBP10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Cdyl2Q9D5D8 503 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tnfaip8l2Q9D8Y7 184 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 1700018B08RikQ9DA83 213 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Serpina1fQ9DCQ7 411 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tspan3Q9QY33 253 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Duox1A2AQ92 1551 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Prdm15E9Q8T2 1174 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Bmpr2O35607 1038 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 GzmgP13366 248 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Rb1P13405 921 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ccnb1P24860 430 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Nos2P29477 1144 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 NcstnP57716 708 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mrgprx2Q3UG50 352 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tgfbrap1Q3UR70 860 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Q3UTZ3 580 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Trim67Q505D9 768 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tgoln2Q62314 363 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Styk1Q6J9G1 429 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ugt2a2Q6PDD0 528 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mtmr12Q80TA6 747 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Arhgap28Q8BN58 729 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Brat1Q8C3R1 822 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Rfc5Q9D0F6 339 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tomm20lQ9D4V6 152 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Wdr12Q9JJA4 423 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Katna1Q9WV86 491 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tjp1P39447 1745 aaKnown RBP10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tnfrsf18O35714 228 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 CkmP07310 381 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Alkbh5Q3TSG4 395 aaKnown RBP10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Nt5dc3Q3UHB1 546 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Lipo3Q3UT41 399 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Itga1Q3V3R4 1179 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Myl6Q60605 151 aaKnown RBP10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 PhgdhQ61753 533 aaKnown RBP10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 RfflQ6ZQM0 377 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tas2r104Q7M723 302 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Exd1Q8CDF7 570 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mcoln2Q8K595 566 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 GaleQ8R059 347 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Olfr1302Q8VGE9 315 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Pmf1Q9CPV5 202 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 UqcrbQ9D855 111 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Dusp21Q9D9D8 189 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Pgam1Q9DBJ1 254 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 PllpQ9DCU2 182 aa10.94□□□□□ -0.66
Ciita-201ENSMUST00000023147 Rps6ka3P18654 740 aaKnown RBP10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 RxrbP28704 520 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Serpina3cP29621 417 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Rpl26P61255 145 aaKnown RBP10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Polr2lP62876 67 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Rpl22P67984 128 aaKnown RBP10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mfsd14aP70187 490 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Dnal1Q05A62 190 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gm813Q3UWK9 176 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Cdc14aQ6GQT0 603 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Sfrp1Q8C4U3 314 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ppp1r11Q8K1L5 131 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Olfr1502Q8VG66 316 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 MyocdQ8VIM5 935 aa10.93□□□□□ -0.66
Ciita-201ENSMUST00000023147 Epn3Q91W69 636 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms