RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SORCS1Q8WY21 1168 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 EDAQ92838 391 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 MYO19Q96H55 970 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 RPL10LQ96L21 214 aaKnown RBP12.54□□□□□ -0.4
LINC00339-213ENST00000642137 TMEM121Q9BTD3 319 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 OSBPL6Q9BZF3 934 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 CEP44Q9C0F1 390 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 C10orf88Q9H8K7 445 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 LTB4R2Q9NPC1 389 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 RBM22Q9NW64 420 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SUN2Q9UH99 717 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 PCYOX1Q9UHG3 505 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SLCO3A1Q9UIG8 710 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 TRHDEQ9UKU6 1024 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 HCN2Q9UL51 889 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 SLC8A2Q9UPR5 921 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 ACTL7AQ9Y615 435 aa12.54□□□□□ -0.4
LINC00339-213ENST00000642137 PRUNE2Q8WUY3 3088 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 CTAGE15A4D2H0 777 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 C5orf60A6NFR6 353 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 KCNK1O00180 336 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 KCNN4O15554 427 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 DCXO43602 365 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 GCATO75600 419 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 CTAGE8P0CG41 777 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 CHRNB1P11230 501 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 CES1P23141 567 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 PTPN3P26045 913 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 HSPA9P38646 679 aaKnown RBP12.53□□□□□ -0.4
LINC00339-213ENST00000642137 MMP13P45452 471 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 STK19P49842 368 aaPredicted RBP12.53□□□□□ -0.4
LINC00339-213ENST00000642137 WASHC5Q12768 1159 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 ZNF234Q14588 700 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 DLG2Q15700 870 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 HSF5Q4G112 596 aaPredicted RBP12.53□□□□□ -0.4
LINC00339-213ENST00000642137 TTC27Q6P3X3 843 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 TRMT11Q7Z4G4 463 aaKnown RBP12.53□□□□□ -0.4
LINC00339-213ENST00000642137 CTAGE6Q86UF2 777 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 CTAGE4Q8IX94 777 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 SIX5Q8N196 739 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 ALLCQ8N6M5 410 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 ZNF513Q8N8E2 541 aaPredicted RBP12.53□□□□□ -0.4
LINC00339-213ENST00000642137 RTP4Q96DX8 246 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 TEKT5Q96M29 485 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 PSKH2Q96QS6 385 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 TMEM245Q9H330 911 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 LMAN1LQ9HAT1 526 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 RBM12Q9NTZ6 932 aaKnown RBP12.53□□□□□ -0.4
LINC00339-213ENST00000642137 HAUS2Q9NVX0 235 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 NDRG2Q9UN36 371 aaKnown RBP12.53□□□□□ -0.4
LINC00339-213ENST00000642137 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 F5P12259 2224 aa12.53□□□□□ -0.4
LINC00339-213ENST00000642137 TARSL2A2RTX5 802 aaKnown RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 FAM170BA6NMN3 283 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 K7ERQ8 282 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 SGK1O00141 431 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 SMAD6O43541 496 aaKnown RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ZNF821O75541 412 aaPredicted RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 NEBLO76041 1014 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 STK10O94804 968 aaKnown RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 TMCC1O94876 653 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 CHRM1P11229 460 aaPredicted RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ALADP13716 330 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 TIE1P35590 1138 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 CSNK1DP48730 415 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ZBTB17Q13105 803 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 FZD5Q13467 585 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 LRRC32Q14392 662 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ZNF235Q14590 738 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 P3H1Q32P28 736 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ACCSLQ4AC99 568 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 FNDC3BQ53EP0 1204 aaKnown RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ANKRD20A2Q5SQ80 823 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ANKRD20A1Q5TYW2 823 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ANKRD20A3Q5VUR7 823 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 EGFLAMQ63HQ2 1017 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 SDE2Q6IQ49 451 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 GSTA5Q7RTV2 222 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 PID1Q7Z2X4 250 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 KLHL7Q8IXQ5 586 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 MMGT1Q8N4V1 131 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 PCDH20Q8N6Y1 951 aaKnown RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 CNTD1Q8N815 330 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 FAM71DQ8N9W8 422 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 USP33Q8TEY7 942 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 FRS2Q8WU20 508 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 SLCO2A1Q92959 643 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 CINPQ9BW66 212 aaPredicted RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 DDX47Q9H0S4 455 aaKnown RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 SEPT10Q9P0V9 454 aa12.52□□□□□ -0.41
LINC00339-213ENST00000642137 FCF1Q9Y324 198 aaKnown RBP12.52□□□□□ -0.41
LINC00339-213ENST00000642137 ATG2BQ96BY7 2078 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 ANTXRLA6NF34 631 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 TTC34A8MYJ7 566 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 RNF103O00237 685 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 GSRP00390 522 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms