RNA–Protein interactions for RNA: ENST00000639941.1

SHISA9-205, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHISA9, Length 1,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-205ENST00000639941 C1QTNF3-AMACRE9PGA6 284 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 PLRG1O43660 514 aaKnown RBP22.99■■□□□ 1.27
SHISA9-205ENST00000639941 OPHN1O60890 802 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 RAMP2O60895 175 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 FAM228BP0C875 321 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 CD59P13987 128 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 AFF3P51826 1226 aaKnown RBP22.99■■□□□ 1.27
SHISA9-205ENST00000639941 TAS2R38P59533 333 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 PIP5KL1Q5T9C9 394 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 FAM46CQ5VWP2 391 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 RETSATQ6NUM9 610 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 LEKR1Q6ZMV7 388 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 DEFB124Q8NES8 71 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 VOPP1Q96AW1 172 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 SLC6A18Q96N87 628 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.99■■□□□ 1.27
SHISA9-205ENST00000639941 SNRNP25Q9BV90 132 aaKnown RBP22.99■■□□□ 1.27
SHISA9-205ENST00000639941 CEP44Q9C0F1 390 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 MAGEH1Q9H213 219 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 ARHGAP20Q9P2F6 1191 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 BZW2Q9Y6E2 419 aaKnown RBP22.99■■□□□ 1.27
SHISA9-205ENST00000639941 WASF2Q9Y6W5 498 aa22.99■■□□□ 1.27
SHISA9-205ENST00000639941 WASH4PA8MWX3 477 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 WNT9AO14904 365 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 MYBL1P10243 752 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 CSRP1P21291 193 aaKnown RBP22.98■■□□□ 1.27
SHISA9-205ENST00000639941 MIPP30301 263 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 CCR5P51681 352 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 SLC20A2Q08357 652 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 POLD3Q15054 466 aaPredicted RBP22.98■■□□□ 1.27
SHISA9-205ENST00000639941 ARSIQ5FYB1 569 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 RNF214Q8ND24 703 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 GRIN3AQ8TCU5 1115 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 IQCDQ96DY2 449 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 KCTD15Q96SI1 283 aaPredicted RBP22.98■■□□□ 1.27
SHISA9-205ENST00000639941 EPAS1Q99814 870 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 ZDHHC5Q9C0B5 715 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 PCSK1NQ9UHG2 260 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 NENFQ9UMX5 172 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 AP4E1Q9UPM8 1137 aa22.98■■□□□ 1.27
SHISA9-205ENST00000639941 UPK3BL1B0FP48 263 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 UPK3BL2E5RIL1 263 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 SLC7A4O43246 635 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 LRCH4O75427 683 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 TCF4P15884 667 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 ETFBP38117 255 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 GRIA4P48058 902 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 NFKBIBQ15653 356 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 KIF19Q2TAC6 998 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 PCDH20Q8N6Y1 951 aaKnown RBP22.97■■□□□ 1.27
SHISA9-205ENST00000639941 TMIEQ8NEW7 156 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 TRIM11Q96F44 468 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 HMCESQ96FZ2 354 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 THAP2Q9H0W7 228 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 IL36AQ9UHA7 158 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 FNDC3AQ9Y2H6 1198 aaKnown RBP22.97■■□□□ 1.27
SHISA9-205ENST00000639941 SNX11Q9Y5W9 270 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 SCINQ9Y6U3 715 aa22.97■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3DA0A087WVF3 549 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3IA0A087WXS9 549 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3EA0A087X179 549 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3KA0A087X1G2 549 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 CXorf51AA0A1B0GTR3 108 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3FA6NER0 549 aaPredicted RBP22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3LB9A6J9 549 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 KPNA3O00505 521 aaPredicted RBP22.96■■□□□ 1.27
SHISA9-205ENST00000639941 LATO43561 262 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 KDELR3O43731 214 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 LEFTY1O75610 366 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 WNT1P04628 370 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3HP0C7X1 549 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 HLA-BQ31612 363 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 ERMARDQ5T6L9 678 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3GQ6DHY5 549 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3CQ6IPX1 549 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TBC1D3Q8IZP1 549 aaPredicted RBP22.96■■□□□ 1.27
SHISA9-205ENST00000639941 NETO2Q8NC67 525 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 CCDC114Q96M63 670 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 TM6SF2Q9BZW4 377 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 DHX35Q9H5Z1 703 aaKnown RBP22.96■■□□□ 1.27
SHISA9-205ENST00000639941 GAREM1Q9H706 876 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 ANKRD6Q9Y2G4 727 aa22.96■■□□□ 1.27
SHISA9-205ENST00000639941 FARP1Q9Y4F1 1045 aaPredicted RBP22.96■■□□□ 1.27
SHISA9-205ENST00000639941 RASA4BC9J798 803 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 RASA4O43374 803 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 PRNPP04156 253 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 CEACAM1P13688 526 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 IL1R2P27930 398 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 HNRNPH3P31942 346 aaKnown RBP22.95■■□□□ 1.26
SHISA9-205ENST00000639941 GKP32189 559 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 DNA2P51530 1060 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 CCNHP51946 323 aaPredicted RBP22.95■■□□□ 1.26
SHISA9-205ENST00000639941 TPI1P60174 286 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 RACK1P63244 317 aaKnown RBP22.95■■□□□ 1.26
SHISA9-205ENST00000639941 CARD16Q5EG05 197 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 ISG20Q96AZ6 181 aaKnown RBP22.95■■□□□ 1.26
SHISA9-205ENST00000639941 ARHGEF26Q96DR7 871 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 BTBD6Q96KE9 485 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 CAMK1GQ96NX5 476 aa22.95■■□□□ 1.26
SHISA9-205ENST00000639941 KDM4CQ9H3R0 1056 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms