RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SARDHQ9UL12 918 aa18.08■□□□□ 0.48
PTPN11-207ENST00000639857 LUC7L2Q9Y383 392 aaKnown RBP18.08■□□□□ 0.48
PTPN11-207ENST00000639857 FAM47DPA6NHR8 397 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 K7ERQ8 282 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 SMAD6O43541 496 aaKnown RBP18.07■□□□□ 0.48
PTPN11-207ENST00000639857 RNF8O76064 485 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 GLDCP23378 1020 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 ZNF135P52742 658 aaPredicted RBP18.07■□□□□ 0.48
PTPN11-207ENST00000639857 ACAP1Q15027 740 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 POLD3Q15054 466 aaPredicted RBP18.07■□□□□ 0.48
PTPN11-207ENST00000639857 TRIM69Q86WT6 500 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 CASKIN2Q8WXE0 1202 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 SKA1Q96BD8 255 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 PPP1R16AQ96I34 528 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 PREBQ9HCU5 417 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 NDFIP2Q9NV92 336 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 IL36AQ9UHA7 158 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 DNAI1Q9UI46 699 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 PCDHGB2Q9Y5G2 931 aa18.07■□□□□ 0.48
PTPN11-207ENST00000639857 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.07■□□□□ 0.482e-7■□□□□ 10.1
PTPN11-207ENST00000639857 ATMINO43313 823 aaPredicted RBP18.06■□□□□ 0.48
PTPN11-207ENST00000639857 BNIP3LO60238 219 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 ZNF821O75541 412 aaPredicted RBP18.06■□□□□ 0.48
PTPN11-207ENST00000639857 GYPCP04921 128 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 CTSLP07711 333 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 SKILP12757 684 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 CNTN1Q12860 1018 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 TRIM14Q14142 442 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 PARP15Q460N3 678 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 N4BP2L1Q5TBK1 243 aaPredicted RBP18.06■□□□□ 0.48
PTPN11-207ENST00000639857 NEK5Q6P3R8 708 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.06■□□□□ 0.48
PTPN11-207ENST00000639857 LRIG1Q96JA1 1093 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 DYRK4Q9NR20 520 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 DMTF1Q9Y222 760 aa18.06■□□□□ 0.48
PTPN11-207ENST00000639857 KNL1Q8NG31 2342 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 DOCK9Q9BZ29 2069 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 CABIN1Q9Y6J0 2220 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 A0A1B0GVT2 93 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 VILLO15195 856 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 CBFA2T2O43439 604 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 KDELR3O43731 214 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 DFNA5O60443 496 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 CD160O95971 181 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 CD59P13987 128 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 KCNA4P22459 653 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 PMLP29590 882 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 ACVRL1P37023 503 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 CSNK1EP49674 416 aaKnown RBP18.05■□□□□ 0.48
PTPN11-207ENST00000639857 METAP1P53582 386 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 TPI1P60174 286 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 SHC2P98077 582 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 BNC1Q01954 994 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 ZNF252P-AS1Q0IIN9 211 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 CARD16Q5EG05 197 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 ERMARDQ5T6L9 678 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 DPY19L3Q6ZPD9 716 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 UMODL1-AS1Q8N2C9 162 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 PYROXD2Q8N2H3 581 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 HDAC8Q9BY41 377 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 MAGEB5Q9BZ81 275 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 GAREM1Q9H706 876 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 AP4E1Q9UPM8 1137 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 ANKRD6Q9Y2G4 727 aa18.05■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3DA0A087WVF3 549 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3IA0A087WXS9 549 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3EA0A087X179 549 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3KA0A087X1G2 549 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3FA6NER0 549 aaPredicted RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3LB9A6J9 549 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 KPNA3O00505 521 aaPredicted RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 CREB3O43889 395 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 PRPSAP2O60256 369 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 GSRP00390 522 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3HP0C7X1 549 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 ITGB7P26010 798 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 HNRNPH3P31942 346 aaKnown RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 PCK1P35558 622 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 HLA-BQ31612 363 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 INO80DQ53TQ3 878 aaPredicted RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 SLC45A4Q5BKX6 768 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 PIP5KL1Q5T9C9 394 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3GQ6DHY5 549 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3CQ6IPX1 549 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 NAPEPLDQ6IQ20 393 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 ADAT2Q7Z6V5 191 aaKnown RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 PRPF39Q86UA1 669 aaKnown RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 ZSCAN30Q86W11 494 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TBC1D3Q8IZP1 549 aaPredicted RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 DEFB124Q8NES8 71 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 OR2I1PQ8NGU4 316 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 HEPHQ9BQS7 1158 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 XPO4Q9C0E2 1151 aaKnown RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TNKS2Q9H2K2 1166 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 NOL6Q9H6R4 1146 aaKnown RBP18.04■□□□□ 0.48
PTPN11-207ENST00000639857 SLCO1B1Q9Y6L6 691 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 WASF2Q9Y6W5 498 aa18.04■□□□□ 0.48
PTPN11-207ENST00000639857 TRPM6Q9BX84 2022 aa18.03■□□□□ 0.48
PTPN11-207ENST00000639857 CTSKP43235 329 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms