RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 IL1BP01584 269 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 SLC2A3P11169 496 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 CKMT2P17540 419 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 TACR2P21452 398 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 ITPKBP27987 946 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 ACTN2P35609 894 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 PPP1R2P41236 205 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 PTGIRP43119 386 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 GPD2P43304 727 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 STK19P49842 368 aaPredicted RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 PMS1P54277 932 aaKnown RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 INSM1Q01101 510 aaPredicted RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 SEMG2Q02383 582 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 CENPCQ03188 943 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 TLE3Q04726 772 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 CETN1Q12798 172 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 PNOCQ13519 176 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 PWP1Q13610 501 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 SETMARQ53H47 684 aaPredicted RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 RABGAP1LQ5R372 815 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 FAM46CQ5VWP2 391 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 RAP1GAP2Q684P5 730 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 ANKRD40Q6AI12 368 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 PRPF39Q86UA1 669 aaKnown RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 CHSY1Q86X52 802 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 ERICH1Q86X53 443 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 SPATS2Q86XZ4 545 aaKnown RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 TREML1Q86YW5 311 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 APCDD1Q8J025 514 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 LGI2Q8N0V4 545 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 FMR1NBQ8N0W7 255 aaPredicted RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 CCAR2Q8N163 923 aaKnown RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 CFAP52Q8N1V2 620 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 STK40Q8N2I9 435 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 ATP6V0D2Q8N8Y2 350 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 TMEM145Q8NBT3 493 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 OR4C6Q8NH72 309 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 LMO3Q8TAP4 145 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 OR8D1Q8WZ84 308 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 ERCC4Q92889 916 aaPredicted RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 FAM149B1Q96BN6 582 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 PPP1R9BQ96SB3 815 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 THAP9Q9H5L6 903 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 POPDC2Q9HBU9 364 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 ARHGAP20Q9P2F6 1191 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 TJP2Q9UDY2 1190 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 XPO7Q9UIA9 1087 aaKnown RBP5.65□□□□□ -1.5
PDE4D-229ENST00000638939 SLC25A13Q9UJS0 675 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 CLCA2Q9UQC9 943 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 NAALADL1Q9UQQ1 740 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 HS3ST2Q9Y278 367 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 PCDHB4Q9Y5E5 795 aa5.65□□□□□ -1.5
PDE4D-229ENST00000638939 TBC1D3DA0A087WVF3 549 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3IA0A087WXS9 549 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3EA0A087X179 549 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3KA0A087X1G2 549 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TRIM49BA6NDI0 452 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3FA6NER0 549 aaPredicted RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 CAPN8A6NHC0 703 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 KCNU1A8MYU2 1149 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3LB9A6J9 549 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 E5RJQ4 531 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 RNF225M0QZC1 329 aaPredicted RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 EIF1AYO14602 144 aaKnown RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 CAPN9O14815 690 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 MED7O43513 233 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 SIGLEC6O43699 453 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 RTN2O75298 545 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TRUB2O95900 331 aaKnown RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 PRB1P04280 392 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 GP1BAP07359 652 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 GLI1P08151 1106 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3HP0C7X1 549 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 PLA2G2AP14555 144 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 VAV1P15498 845 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 GLDCP23378 1020 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 ST13P50502 369 aaKnown RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 UCNP55089 124 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 CLDN6P56747 220 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 PCBP4P57723 403 aaKnown RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 YWHAZP63104 245 aaKnown RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 E2F1Q01094 437 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 LRMPQ12912 555 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 PDCLQ13371 301 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 STIM1Q13586 685 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 ZC3H12AQ5D1E8 599 aaKnown RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 PIP5KL1Q5T9C9 394 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 SYPL2Q5VXT5 272 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3GQ6DHY5 549 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3CQ6IPX1 549 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 NEK5Q6P3R8 708 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 IGF2-ASQ6U949 168 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 GPR155Q7Z3F1 870 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TMEM110Q86TL2 294 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 ARHGEF19Q8IW93 802 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 SPACA3Q8IXA5 215 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 TBC1D3Q8IZP1 549 aaPredicted RBP5.64□□□□□ -1.51
PDE4D-229ENST00000638939 ZNF843Q8N446 348 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 SH2D3CQ8N5H7 860 aa5.64□□□□□ -1.51
PDE4D-229ENST00000638939 ZNF248Q8NDW4 579 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms