RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 BAP1Q92560 729 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 CENPIQ92674 756 aaPredicted RBP8.04□□□□□ -1.12
PNKP-229ENST00000637897 C1orf74Q96LT6 269 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 TRIM62Q9BVG3 475 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 TTYH3Q9C0H2 523 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 NOL6Q9H6R4 1146 aaKnown RBP8.04□□□□□ -1.12
PNKP-229ENST00000637897 WDCPQ9H6R7 721 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 METTL5Q9NRN9 209 aaKnown RBP8.04□□□□□ -1.12
PNKP-229ENST00000637897 TM7SF3Q9NS93 570 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 TAS2R14Q9NYV8 317 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 SUSD2Q9UGT4 822 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 HS3ST2Q9Y278 367 aa8.04□□□□□ -1.12
PNKP-229ENST00000637897 UQCRHLA0A096LP55 91 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 FAM47DPA6NHR8 397 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 MCF2LO15068 1137 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 VILLO15195 856 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 SPINT1O43278 529 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 PLRG1O43660 514 aaKnown RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 CLDN11O75508 207 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 RNASEH2AO75792 299 aaKnown RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 LSM8O95777 96 aaKnown RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 UQCRHP07919 91 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 SLC2A3P11169 496 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 GNSP15586 552 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 C5AR1P21730 350 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 RFC1P35251 1148 aaPredicted RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 AFF3P51826 1226 aaKnown RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 ATXN3P54252 364 aaPredicted RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 CLDN6P56747 220 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 GSCP56915 257 aaPredicted RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 BPIFB4P59827 614 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ATP11AP98196 1134 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 DEUP1Q05D60 604 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 FGL2Q14314 439 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ELAVL3Q14576 367 aaKnown RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 PPP1R15BQ5SWA1 713 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 TTC39BQ5VTQ0 682 aaPredicted RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 MON1BQ7L1V2 547 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 IRF2BP2Q7Z5L9 587 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 CCDC170Q8IYT3 715 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 PYROXD2Q8N2H3 581 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ARFGAP1Q8N6T3 406 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ZNF557Q8N988 423 aaPredicted RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 NETO2Q8NC67 525 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 NEK11Q8NG66 645 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 OR2T34Q8NGX1 318 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ADAMTS14Q8WXS8 1223 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 SNX19Q92543 992 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ZNF592Q92610 1267 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 C11orf70Q9BRQ4 267 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ACE2Q9BYF1 805 aaPredicted RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 ZDHHC5Q9C0B5 715 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 KLC2Q9H0B6 622 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ZMIZ1Q9ULJ6 1067 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 FZD4Q9ULV1 537 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 SCML1Q9UN30 329 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ZFR2Q9UPR6 939 aaKnown RBP8.03□□□□□ -1.12
PNKP-229ENST00000637897 MSRB2Q9Y3D2 182 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 NEUROG3Q9Y4Z2 214 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ADGRG1Q9Y653 693 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
PNKP-229ENST00000637897 ACACAQ13085 2346 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 A0A1B0GTQ1 180 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 RIOK3O14730 519 aaKnown RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 IPO7O95373 1038 aaKnown RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 IL1BP01584 269 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 GIMD1P0DJR0 217 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 HNRNPH3P31942 346 aaKnown RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 GKP32189 559 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 RDXP35241 583 aaKnown RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 ADRA1BP35368 520 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 CYLC1P35663 651 aaPredicted RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 CCR5P51681 352 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 NXPH1P58417 271 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 ST8SIA6P61647 398 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 RPL7AP62424 266 aaKnown RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 RACK1P63244 317 aaKnown RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 KRT83P78385 493 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 NRG1Q02297 640 aaPredicted RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 C1QBPQ07021 282 aaKnown RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 BNIP3Q12983 259 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 ZNF177Q13360 481 aaPredicted RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 CAMK2BQ13554 666 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 E2F5Q15329 346 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 CLEC16AQ2KHT3 1053 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 TTC31Q49AM3 519 aaPredicted RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 RABGAP1LQ5R372 815 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 TPRG1LQ5T0D9 272 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 WDR59Q6PJI9 974 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 RAD9BQ6WBX8 426 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 SYT10Q6XYQ8 523 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 DPY19L3Q6ZPD9 716 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 CYP4V2Q6ZWL3 525 aaPredicted RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 GATAD2AQ86YP4 633 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 TMEM145Q8NBT3 493 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 OR14C36Q8NHC7 312 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 PIP4K2CQ8TBX8 421 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 SAP25Q8TEE9 199 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms