RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 OLA1Q9NTK5 396 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 PCDHB5Q9Y5E4 795 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 HTTP42858 3142 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
CLN8-212ENST00000637083 PATJQ8NI35 1801 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 A0A1W2PQH9 124 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 SLCO1B7G3V0H7 640 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 ENTPD5O75356 428 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 CRABP2P29373 138 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 GCKP35557 465 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 MAGEA11P43364 429 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 PSEN1P49768 467 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 TBX4P57082 545 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 DSC1Q08554 894 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 HNRNPDQ14103 355 aaKnown RBP12.31□□□□□ -0.44
CLN8-212ENST00000637083 USP10Q14694 798 aaKnown RBP12.31□□□□□ -0.44
CLN8-212ENST00000637083 TSNAXIP1Q2TAA8 658 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 TRMT5Q32P41 509 aaKnown RBP12.31□□□□□ -0.44
CLN8-212ENST00000637083 ZC3HC1Q86WB0 502 aaKnown RBP12.31□□□□□ -0.44
CLN8-212ENST00000637083 CALML6Q8TD86 181 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 CMTM5Q96DZ9 223 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 GLT1D1Q96MS3 346 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 SORT1Q99523 831 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 FICDQ9BVA6 458 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 TRMT13Q9NUP7 481 aaKnown RBP12.31□□□□□ -0.44
CLN8-212ENST00000637083 ABI2Q9NYB9 513 aaPredicted RBP12.31□□□□□ -0.44
CLN8-212ENST00000637083 SLC39A10Q9ULF5 831 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 MAGED2Q9UNF1 606 aaPredicted RBP12.31□□□□□ -0.44
CLN8-212ENST00000637083 TCAF1Q9Y4C2 921 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 HS3ST4Q9Y661 456 aa12.31□□□□□ -0.44
CLN8-212ENST00000637083 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 TMEM88BA6NKF7 163 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 PRR5-ARHGAP8B1AHC4 643 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 TADA2AO75478 443 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 TM7SF2O76062 418 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 MOCS2O96007 188 aaPredicted RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 ITGB1P05556 798 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 RHOQP17081 205 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 OR1G1P47890 313 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 FAM189BP81408 668 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 ARHGAP8P85298 464 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 KDSRQ06136 332 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 GRM3Q14832 879 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 CMPK2Q5EBM0 449 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 KIAA0930Q6ICG6 404 aaPredicted RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 KIAA0408Q6ZU52 694 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 TREML1Q86YW5 311 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 SCUBE1Q8IWY4 988 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 UMODL1-AS1Q8N2C9 162 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 SPATA22Q8NHS9 363 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 EBF4Q9BQW3 602 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 ZYG11BQ9C0D3 744 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 ILKAPQ9H0C8 392 aaPredicted RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 CDH19Q9H159 772 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 TRPV6Q9H1D0 765 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 SLC25A51Q9H1U9 297 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 TASP1Q9H6P5 420 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 VPS45Q9NRW7 570 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 OXSMQ9NWU1 459 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 COMMD8Q9NX08 183 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 NKX1-2Q9UD57 310 aaPredicted RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 IPO11Q9UI26 975 aaKnown RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 ACOT9Q9Y305 439 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 HEATR9A2RTY3 570 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 G3V2L1 256 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 MSI1O43347 362 aaKnown RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 SIN3BO75182 1162 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 DDHD2O94830 711 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 RTN3O95197 1032 aaPredicted RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 ELNP15502 786 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 STMN1P16949 149 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 GM2AP17900 193 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 PRDX6P30041 224 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 ADRA1AP35348 466 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 IDH3AP50213 366 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 ACLYP53396 1101 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 TUBB3Q13509 450 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 TAF11Q15544 211 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 RABGAP1LQ5R372 815 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 LIPMQ5VYY2 423 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 ZYG11AQ6WRX3 759 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 ARHGAP36Q6ZRI8 547 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 COLGALT2Q8IYK4 626 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 PLD6Q8N2A8 252 aaKnown RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 RBM15BQ8NDT2 890 aaKnown RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 TTC8Q8TAM2 541 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 STON2Q8WXE9 905 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 N4BP2L2Q92802 583 aaPredicted RBP12.3□□□□□ -0.44
CLN8-212ENST00000637083 SLC39A13Q96H72 371 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 ZNF778Q96MU6 729 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 FAM161BQ96MY7 647 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 NMUR1Q9HB89 426 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 PNPOQ9NVS9 261 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 ZNF358Q9NW07 568 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 RNF186Q9NXI6 227 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 CLIC5Q9NZA1 410 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms