RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 USP49Q70CQ1 688 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CHST3Q7LGC8 479 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 RTN4RL1Q86UN2 441 aaPredicted RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 CEP57Q86XR8 500 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SLC43A2Q8N370 569 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 TCAIMQ8N3R3 496 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 POMGNT2Q8NAT1 580 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 C3orf20Q8ND61 904 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 IL31RAQ8NI17 732 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SETD6Q8TBK2 473 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 KCNE4Q8WWG9 221 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CPA5Q8WXQ8 436 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 DNAAF4Q8WXU2 420 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 NCSTNQ92542 709 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 THRSPQ92748 146 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 KIFAP3Q92845 792 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SLC22A18Q96BI1 424 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FAM149B1Q96BN6 582 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 EID2BQ96D98 161 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 MRGPRX3Q96LB0 322 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FGD4Q96M96 766 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CAMK1GQ96NX5 476 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 TUBGCP5Q96RT8 1024 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 LMF1Q96S06 567 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ABHD1Q96SE0 405 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 UHRF1Q96T88 793 aaPredicted RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 GORASP1Q9BQQ3 440 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ACE2Q9BYF1 805 aaPredicted RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 MRPL37Q9BZE1 423 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 KLHL4Q9C0H6 718 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SLC5A7Q9GZV3 580 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.1□□□□□ -1.91
VIM-210ENST00000637053 IKZF4Q9H2S9 585 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 MUC13Q9H3R2 512 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ABHD16BQ9H3Z7 469 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 TMEM206Q9H813 350 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 COQ10BQ9H8M1 238 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FBRSL1Q9HCM7 1045 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 SEPSECSQ9HD40 501 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 TM7SF3Q9NS93 570 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CENPMQ9NSP4 180 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 NUDT15Q9NV35 164 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 RAB20Q9NX57 234 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SMPD3Q9NY59 655 aaPredicted RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 TMOD3Q9NYL9 352 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 MRPL15Q9P015 296 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 NDUFAF4Q9P032 175 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FBLN5Q9UBX5 448 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 DDX19BQ9UMR2 479 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CFL2Q9Y281 166 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 EXOC6BQ9Y2D4 811 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 MAN2B2Q9Y2E5 1009 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 R3HDM2Q9Y2K5 976 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 COQ6Q9Y2Z9 468 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PCDHA8Q9Y5H6 950 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 NR2E3Q9Y5X4 410 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FAM205AQ6ZU69 1335 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SBNO1A3KN83 1393 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 LMTK3Q96Q04 1460 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 PEG3Q9GZU2 1588 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 TTC26A0AVF1 554 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 GSAPA4D1B5 854 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 MFSD2BA6NFX1 497 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 FAM47DPA6NHR8 397 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 E9PMD0 336 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 GOLGA8MH3BSY2 632 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 PIP5K1BO14986 540 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 PHGDHO43175 533 aaKnown RBP3.09□□□□□ -1.91
VIM-210ENST00000637053 LAMTOR5O43504 91 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 ASNA1O43681 348 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 NPHS1O60500 1241 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 MTX2O75431 263 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 AKR7A3O95154 331 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 PTBP3O95758 552 aaKnown RBP3.09□□□□□ -1.91
VIM-210ENST00000637053 GNA14O95837 355 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 CLPTM1O96005 669 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 OTCP00480 354 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 F9P00740 461 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 LMNAP02545 664 aaKnown RBP3.09□□□□□ -1.91
VIM-210ENST00000637053 FYNP06241 537 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 PFKMP08237 780 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 CYC1P08574 325 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 STAG3L3P0CL85 134 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 GLI4P10075 376 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 UBL4AP11441 157 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 CCDC130P13994 396 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 FDPSP14324 419 aaKnown RBP3.09□□□□□ -1.91
VIM-210ENST00000637053 PECAM1P16284 738 aaPredicted RBP3.09□□□□□ -1.91
VIM-210ENST00000637053 ZFXP17010 805 aaPredicted RBP3.09□□□□□ -1.91
VIM-210ENST00000637053 CPT2P23786 658 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 NR2F2P24468 414 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 LSP1P33241 339 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 MDH1P40925 334 aaKnown RBP3.09□□□□□ -1.91
VIM-210ENST00000637053 GARSP41250 739 aaKnown RBP3.09□□□□□ -1.91
VIM-210ENST00000637053 ME1P48163 572 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 PCP4P48539 62 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 CCR3P51677 355 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 BMXP51813 675 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 POLE2P56282 527 aa3.09□□□□□ -1.91
VIM-210ENST00000637053 VBP1P61758 197 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms