RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ZNF599Q96NL3 588 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 OSBPL9Q96SU4 736 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 CEP44Q9C0F1 390 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 BRD8Q9H0E9 1235 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
CLN6-216ENST00000636876 C2orf42Q9NWW7 574 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 CACNA1HO95180 2353 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 CKAP5Q14008 2032 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 SHROOM3Q8TF72 1996 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 EDDM13A0A1B0GTR0 161 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 A0A1W2PQF6 199 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 CES2O00748 559 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 FANCGO15287 622 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 PEX11BO96011 259 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 EPHX1P07099 455 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 AVPR2P30518 371 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 OTUD4Q01804 1114 aaKnown RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 ZNF33AQ06730 810 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 PPIDQ08752 370 aaKnown RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 CAMK2GQ13555 558 aaPredicted RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 RFTN1Q14699 578 aaPredicted RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 STARD3Q14849 445 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 ACCSLQ4AC99 568 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 PAPD7Q5XG87 772 aaKnown RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 TIGD7Q6NT04 549 aaPredicted RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 TMEM92Q6UXU6 159 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 MAMSTRQ6ZN01 415 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 RASGEF1CQ8N431 466 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 PCDH20Q8N6Y1 951 aaKnown RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 TTC13Q8NBP0 860 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 LRRN4Q8WUT4 740 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 LGMNQ99538 433 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 MTG2Q9H4K7 406 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 SPATA6Q9NWH7 488 aaPredicted RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 R3HDM2Q9Y2K5 976 aaKnown RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 FCF1Q9Y324 198 aaKnown RBP16.29■□□□□ 0.2
CLN6-216ENST00000636876 CACNA1IQ9P0X4 2223 aa16.29■□□□□ 0.2
CLN6-216ENST00000636876 TARSL2A2RTX5 802 aaKnown RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 HACD1B0YJ81 288 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 MATN3O15232 486 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 SYNCRIPO60506 623 aaKnown RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 ZNF821O75541 412 aaPredicted RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 FGGP02679 453 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 VAV1P15498 845 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 TCP1P17987 556 aaKnown RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 CCR3P51677 355 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 XRCC4Q13426 336 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 LBRQ14739 615 aaKnown RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 PRKD1Q15139 912 aaPredicted RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 CYTH1Q15438 398 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 CRY1Q16526 586 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 C9orf64Q5T6V5 341 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 KIAA1211LQ6NV74 962 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 SYT10Q6XYQ8 523 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 Q6ZVU0 165 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 ADAT2Q7Z6V5 191 aaKnown RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 ZSCAN30Q86W11 494 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 CCDC13Q8IYE1 715 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 DTWD2Q8NBA8 298 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 COG1Q8WTW3 980 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 NSMCE1Q8WV22 266 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 MAML1Q92585 1016 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 PTPRN2Q92932 1015 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 C16orf45Q96MC5 204 aaPredicted RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 QKIQ96PU8 341 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLN6-216ENST00000636876 CD248Q9HCU0 757 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 PRSS16Q9NQE7 514 aa16.28■□□□□ 0.2
CLN6-216ENST00000636876 TTC7AQ9ULT0 858 aaPredicted RBP16.28■□□□□ 0.2
CLN6-216ENST00000636876 H7C0C1 242 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 MCF2LO15068 1137 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 SIN3BO75182 1162 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 PAPSS2O95340 614 aaPredicted RBP16.27■□□□□ 0.2
CLN6-216ENST00000636876 PRLRP16471 622 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 CASQ1P31415 396 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 ATP5OP48047 213 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 CXCL12P48061 93 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 DGKEP52429 567 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 EIF3EP60228 445 aaKnown RBP16.27■□□□□ 0.2
CLN6-216ENST00000636876 RHOAP61586 193 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 SATB1Q01826 763 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 NHLH1Q02575 133 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 SLC10A7Q0GE19 358 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 AP1B1Q10567 949 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 LONRF2Q1L5Z9 754 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 SLC45A4Q5BKX6 768 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 ZC3H18Q86VM9 953 aaKnown RBP16.27■□□□□ 0.2
CLN6-216ENST00000636876 TEX26Q8N6G2 289 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 TFB1MQ8WVM0 346 aaKnown RBP16.27■□□□□ 0.2
CLN6-216ENST00000636876 MAIP1Q8WWC4 291 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 FAM118BQ9BPY3 351 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 TM6SF2Q9BZW4 377 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 TNKS2Q9H2K2 1166 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 FBRSQ9HAH7 460 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 LHX3Q9UBR4 397 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 SEPT3Q9UH03 358 aa16.27■□□□□ 0.2
CLN6-216ENST00000636876 PGRMC1O00264 195 aaKnown RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 GSRP00390 522 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 RBP3P10745 1247 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 CCNB1P14635 433 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms